Ready for 4.0 release

GitBucket 4.0 (MySQL and PostgreSQL support)

.github/CONTRIBUTING.md

@@ -0,0 +1,7 @@
+# Guideline for Issues
+
+- At first, See [FAQ](https://github.com/gitbucket/gitbucket/wiki/FAQ) and check issues whether there is a same question or request in the past.
+- If you can't find same question and report, send it to [gitter room](https://gitter.im/gitbucket/gitbucket) before raising an issue.
+- We can also support in Japaneses other than English at [gitter room for Japanese](https://gitter.im/gitbucket/gitbucket_ja).
+- Write an issue in English. At least, write subject in English.
+- First priority of GitBucket is easy installation and reproduce GitHub behavior, so we might reject if your request is against it.

.github/ISSUE_TEMPLATE.md

@@ -0,0 +1,19 @@
+### Before submitting an issue to Gitbucket I have first:
+
+- [] read the [contribution guidelines](https://github.com/gitbucket/gitbucket/blob/master/.github/CONTRIBUTING.md)
+- [] searched for similar already existing issue
+- [] read the documentation and [wiki](https://github.com/gitbucket/gitbucket/wiki) 
+
+*(if you have performed all the above, remove the paragraph and continue describing the issue with template below)*
+
+## Issue
+**Impacted version**: xxxx
+
+**Deployment mode**: *explain here how you use gitbucket : standalone app, under webcontainer (which one), with an http frontend (nginx, httpd, ...)*
+
+**Problem description**:
+- *be as explicit has you can*
+- *describe the problem and its symptoms*
+- *explain how to reproduce*
+- *attach whatever information that can help understanding the context (screen capture, log files)*
+- *do your best to use a correct english (re-read yourself)*

.github/PULL_REQUEST_TEMPLATE.md

@@ -0,0 +1,8 @@
+### Before submitting a pull-request to Gitbucket I have first:
+
+- [] read the [contribution guidelines](https://github.com/gitbucket/gitbucket/blob/master/.github/CONTRIBUTING.md)
+- [] rebased my branch over master
+- [] verified that project is compiling
+- [] verified that tests are passing
+- [] squashed my commits as appropriate *(keep several commits if it is relevant to understand the PR)*
+- [] [marked as closed](https://help.github.com/articles/closing-issues-via-commit-messages/) all issue ID that this PR should correct

CONTRIBUTING.md

@@ -1,7 +0,0 @@
-# Guideline for Issues
-
-- If you have any question about GitBucket, send it to [gitter room](https://gitter.im/gitbucket/gitbucket) before raise an issue.
-- Make sure check whether there is a same question or request in the past.
-- When raise a new issue, write subject in **English** at least.
-- We can also support in Japaneses other than English at [gitter room for Japanese](https://gitter.im/gitbucket/gitbucket_ja).
-- First priority of GitBucket is easy installation and reproduce GitHub behavior, so we might reject if your request is against it.

README.md

@@ -1,7 +1,10 @@
 GitBucket [![Gitter chat](https://badges.gitter.im/gitbucket/gitbucket.png)](https://gitter.im/gitbucket/gitbucket) [![Build Status](https://travis-ci.org/gitbucket/gitbucket.svg?branch=master)](https://travis-ci.org/gitbucket/gitbucket)
 =========
 
-GitBucket is a GitHub clone powered by Scala which has easy installation and high extensibility.
+GitBucket is a Git platform powered by Scala offering:
+- easy installation
+- high extensibility by plugins
+- API compatibility with Github
 
 Features
 --------
@@ -56,10 +59,35 @@ Support
 - Make sure check whether there is a same question or request in the past.
 - When raise a new issue, write subject in **English** at least.
 - We can also support in Japaneses other than English at [gitter room for Japanese](https://gitter.im/gitbucket/gitbucket_ja).
-- First priority of GitBucket is easy installation and reproduce GitHub behavior, so we might reject if your request is against it.
+- First priority of GitBucket is easy installation and API compatibility with GitHub, so we might reject if your request is against it.
 
 Release Notes
 --------
+### 4.0 - 30 Apr 2016
+
+- MySQL and PostgreSQL support
+- Data export and import
+- Migration system has been switched to [solidbase](https://github.com/gitbucket/solidbase)
+
+### 3.14 - 30 Apr 2016
+
+- File attachment and search for wiki pages
+- New extension points to add menus
+- Content-Type of webhooks has been choosable
+
+### 3.13 - 1 Apr 2016
+- Refresh user interface for wide screen
+- Add `pull_request` key in list issues API for pull requests
+- Add `X-Hub-Signature` security to webhooks
+- Provide SHA-256 checksum for `gitbucket.war`
+
+### 3.12 - 27 Feb 2016
+- New GitHub UI
+- Improve mobile view
+- Improve printing style
+- Individual URL for pull request tabs
+- SSH host configuration is separated from HTTP base URL
+
 ### 3.11 - 30 Jan 2016
 - Upgrade Scalatra to 2.4
 - Sidebar and Footer for Wiki
@@ -67,6 +95,7 @@ Release Notes
 - Limit recent updated repositories list
 - Issue actions look-alike GitHub
 - Web API for labels
+- Requires Java 8
 
 ### 3.10 - 30 Dec 2015
 - Move to Bootstrap3

build.sbt

@@ -1,6 +1,6 @@
 val Organization = "gitbucket"
 val Name = "gitbucket"
-val GitBucketVersion = "3.11.0"
+val GitBucketVersion = "4.0.0"
 val ScalatraVersion = "2.4.0"
 val JettyVersion = "9.3.6.v20151106"
 
@@ -10,15 +10,17 @@ sourcesInBase := false
 organization := Organization
 name := Name
 version := GitBucketVersion
-scalaVersion := "2.11.6"
+scalaVersion := "2.11.8"
 
 // dependency settings
 resolvers ++= Seq(
   Classpaths.typesafeReleases,
-  "amateras-repo" at "http://amateras.sourceforge.jp/mvn/",
-  "amateras-snapshot-repo" at "http://amateras.sourceforge.jp/mvn-snapshot/"
+  "amateras" at "http://amateras.sourceforge.jp/mvn/",
+  "sonatype-snapshot" at "https://oss.sonatype.org/content/repositories/snapshots/",
+  "amateras-snapshot" at "http://amateras.sourceforge.jp/mvn-snapshot/"
 )
 libraryDependencies ++= Seq(
+  "org.scala-lang.modules"   %% "scala-java8-compat"           % "0.7.0",
   "org.eclipse.jgit"          % "org.eclipse.jgit.http.server" % "4.1.1.201511131810-r",
   "org.eclipse.jgit"          % "org.eclipse.jgit.archive"     % "4.1.1.201511131810-r",
   "org.scalatra"             %% "scalatra"                     % ScalatraVersion,
@@ -26,7 +28,8 @@ libraryDependencies ++= Seq(
   "org.json4s"               %% "json4s-jackson"               % "3.3.0",
   "io.github.gitbucket"      %% "scalatra-forms"               % "1.0.0",
   "commons-io"                % "commons-io"                   % "2.4",
-  "io.github.gitbucket"       % "markedj"                      % "1.0.6",
+  "io.github.gitbucket"       % "solidbase"                    % "1.0.0",
+  "io.github.gitbucket"       % "markedj"                      % "1.0.8",
   "org.apache.commons"        % "commons-compress"             % "1.10",
   "org.apache.commons"        % "commons-email"                % "1.4",
   "org.apache.httpcomponents" % "httpclient"                   % "4.5.1",
@@ -35,24 +38,27 @@ libraryDependencies ++= Seq(
   "com.typesafe.slick"       %% "slick"                        % "2.1.0",
   "com.novell.ldap"           % "jldap"                        % "2009-10-07",
   "com.h2database"            % "h2"                           % "1.4.190",
+  "mysql"                     % "mysql-connector-java"         % "5.1.38",
+  "org.postgresql"            % "postgresql"                   % "9.4.1208",
   "ch.qos.logback"            % "logback-classic"              % "1.1.1",
-  "com.mchange"               % "c3p0"                         % "0.9.5.2",
+  "com.zaxxer"                % "HikariCP"                     % "2.4.5",
   "com.typesafe"              % "config"                       % "1.3.0",
   "com.typesafe.akka"        %% "akka-actor"                   % "2.3.14",
+  "fr.brouillard.oss.security.xhub" % "xhub4j-core"            % "1.0.0",
   "com.enragedginger"        %% "akka-quartz-scheduler"        % "1.4.0-akka-2.3.x" exclude("c3p0","c3p0"),
   "org.eclipse.jetty"         % "jetty-webapp"                 % JettyVersion     % "provided",
   "javax.servlet"             % "javax.servlet-api"            % "3.1.0"          % "provided",
   "junit"                     % "junit"                        % "4.12"           % "test",
-  "org.scalatra"             %% "scalatra-specs2"              % ScalatraVersion  % "test",
-  "org.specs2"               %% "specs2-junit"                 % "3.6.6"          % "test"
+  "org.scalatra"             %% "scalatra-scalatest"           % ScalatraVersion  % "test",
+  "org.scalaz"               %% "scalaz-core"                  % "7.2.0"          % "test"
 )
 
 // Twirl settings
 play.twirl.sbt.Import.TwirlKeys.templateImports += "gitbucket.core._"
 
 // Compiler settings
-scalacOptions := Seq("-deprecation", "-language:postfixOps")
-javacOptions in compile ++= Seq("-target", "7", "-source", "7")
+scalacOptions := Seq("-deprecation", "-language:postfixOps", "-Ybackend:GenBCode", "-Ydelambdafy:method", "-target:jvm-1.8")
+javacOptions in compile ++= Seq("-target", "8", "-source", "8")
 javaOptions in Jetty += "-Dlogback.configurationFile=/logback-dev.xml"
 testOptions in Test += Tests.Argument(TestFrameworks.Specs2, "junitxml", "console")
 javaOptions in Test += "-Dgitbucket.home=target/gitbucket_home_for_test"
@@ -82,36 +88,36 @@ jrebelSettings
 // Create executable war file
 val executableConfig = config("executable").hide
 Keys.ivyConfigurations += executableConfig
-libraryDependencies	++= Seq(
-  "org.eclipse.jetty"	%	"jetty-security"     % JettyVersion % "executable",
-  "org.eclipse.jetty"	%	"jetty-webapp"       % JettyVersion % "executable",
-  "org.eclipse.jetty"	%	"jetty-continuation" % JettyVersion % "executable",
-  "org.eclipse.jetty"	%	"jetty-server"       % JettyVersion % "executable",
-  "org.eclipse.jetty"	%	"jetty-xml"          % JettyVersion % "executable",
-  "org.eclipse.jetty"	%	"jetty-http"         % JettyVersion % "executable",
-  "org.eclipse.jetty"	%	"jetty-servlet"      % JettyVersion % "executable",
-  "org.eclipse.jetty"	%	"jetty-io"           % JettyVersion % "executable",
-  "org.eclipse.jetty"	%	"jetty-util"         % JettyVersion % "executable"
+libraryDependencies ++= Seq(
+  "org.eclipse.jetty" % "jetty-security"     % JettyVersion % "executable",
+  "org.eclipse.jetty" % "jetty-webapp"       % JettyVersion % "executable",
+  "org.eclipse.jetty" % "jetty-continuation" % JettyVersion % "executable",
+  "org.eclipse.jetty" % "jetty-server"       % JettyVersion % "executable",
+  "org.eclipse.jetty" % "jetty-xml"          % JettyVersion % "executable",
+  "org.eclipse.jetty" % "jetty-http"         % JettyVersion % "executable",
+  "org.eclipse.jetty" % "jetty-servlet"      % JettyVersion % "executable",
+  "org.eclipse.jetty" % "jetty-io"           % JettyVersion % "executable",
+  "org.eclipse.jetty" % "jetty-util"         % JettyVersion % "executable"
 )
 
-val executableKey	= TaskKey[File]("executable")
-executableKey	:= {
+val executableKey = TaskKey[File]("executable")
+executableKey := {
   import org.apache.ivy.util.ChecksumHelper
   import java.util.jar.{ Manifest => JarManifest }
   import java.util.jar.Attributes.{ Name => AttrName }
 
-  val workDir	= Keys.target.value / "executable"
-  val warName	= Keys.name.value + ".war"
+  val workDir   = Keys.target.value / "executable"
+  val warName   = Keys.name.value + ".war"
 
-  val log		= streams.value.log
+  val log       = streams.value.log
   log info s"building executable webapp in ${workDir}"
 
   // initialize temp directory
-  val temp	= workDir / "webapp"
+  val temp  = workDir / "webapp"
   IO delete temp
 
   // include jetty classes
-  val jettyJars	= Keys.update.value select configurationFilter(name = executableConfig.name)
+  val jettyJars = Keys.update.value select configurationFilter(name = executableConfig.name)
   jettyJars foreach { jar =>
     IO unzip (jar, temp, (name:String) =>
       (name startsWith "javax/") ||
@@ -120,31 +126,34 @@ executableKey	:= {
   }
 
   // include original war file
-  val warFile	= (Keys.`package`).value
+  val warFile   = (Keys.`package`).value
   IO unzip (warFile, temp)
 
   // include launcher classes
-  val classDir		= (Keys.classDirectory in Compile).value
-  val launchClasses	= Seq("JettyLauncher.class" /*, "HttpsSupportConnector.class" */)
+  val classDir      = (Keys.classDirectory in Compile).value
+  val launchClasses = Seq("JettyLauncher.class" /*, "HttpsSupportConnector.class" */)
   launchClasses foreach { name =>
     IO copyFile (classDir / name, temp / name)
   }
 
   // zip it up
   IO delete (temp / "META-INF" / "MANIFEST.MF")
-  val contentMappings	= (temp.*** --- PathFinder(temp)).get pair relativeTo(temp)
-  val manifest		= new JarManifest
-  manifest.getMainAttributes put (AttrName.MANIFEST_VERSION,	"1.0")
-  manifest.getMainAttributes put (AttrName.MAIN_CLASS,		"JettyLauncher")
-  val outputFile		= workDir / warName
+  val contentMappings   = (temp.*** --- PathFinder(temp)).get pair relativeTo(temp)
+  val manifest          = new JarManifest
+  manifest.getMainAttributes put (AttrName.MANIFEST_VERSION,    "1.0")
+  manifest.getMainAttributes put (AttrName.MAIN_CLASS,          "JettyLauncher")
+  val outputFile    = workDir / warName
   IO jar (contentMappings, outputFile, manifest)
 
   // generate checksums
-  Seq("md5", "sha1") foreach { algorithm =>
-    IO.write(
-      workDir / (warName + "." + algorithm),
-      ChecksumHelper computeAsString (outputFile, algorithm)
-    )
+  Seq(
+    "md5"    -> "MD5",
+    "sha1"   -> "SHA-1",
+    "sha256" -> "SHA-256"
+  )
+  .foreach { case (extension, algorithm) =>
+    val checksumFile = workDir / (warName + "." + extension)
+    Checksums generate (outputFile, checksumFile, algorithm)
   }
 
   // done
@@ -153,7 +162,7 @@ executableKey	:= {
 }
 /*
 Keys.artifact in (Compile, executableKey) ~= {
-	_ copy (`type` = "war", extension = "war"))
+    _ copy (`type` = "war", extension = "war"))
 }
 addArtifact(Keys.artifact in (Compile, executableKey), executableKey)
 */

doc/how_to_run.md

@@ -32,3 +32,11 @@ $ sbt executable
 ```
 
 at the top of the source tree. It generates executable `gitbucket.war` into `target/executable`. We release this war file as release artifact.
+
+Run tests spec
+---------
+To run the full serie of tests, run the following command:
+
+```
+sbt test
+```

doc/release.md

@@ -6,28 +6,29 @@ Update version number
 
 Note to update version number in files below:
 
-### project/build.scala
+### build.sbt
 
 ```scala
-object MyBuild extends Build {
-  val Organization = "gitbucket"
-  val Name = "gitbucket"
-  val Version = "3.3.0" // <---- update version!!
-  val ScalaVersion = "2.11.6"
-  val ScalatraVersion = "2.3.1"
+val Organization = "gitbucket"
+val Name = "gitbucket"
+val GitBucketVersion = "4.0.0" // <---- update version!!
+val ScalatraVersion = "2.4.0"
+val JettyVersion = "9.3.6.v20151106"
 ```
 
-### src/main/scala/gitbucket/core/servlet/AutoUpdate.scala
+### src/main/scala/gitbucket/core/GitBucketCoreModule.scala
 
 ```scala
-object AutoUpdate {
-
-  /**
-   * The history of versions. A head of this sequence is the current GitBucket version.
-   */
-  val versions = Seq(
-    new Version(3, 3), // <---- add this line!!
-    new Version(3, 2),
+object GitBucketCoreModule extends Module("gitbucket-core",
+  // add new version definition
+  new Version("4.1.0",
+    new LiquibaseMigration("update/gitbucket-core_4.1.xml")
+  ),
+  new Version("4.0.0",
+    new LiquibaseMigration("update/gitbucket-core_4.0.xml"),
+    new SqlMigration("update/gitbucket-core_4.0.sql")
+  )
+)
 ```
 
 Generate release files

project/Checksums.scala

@@ -0,0 +1,34 @@
+import java.security.MessageDigest;
+import scala.annotation._
+import sbt._
+import sbt.Using._
+
+object Checksums {
+  private val bufferSize = 2048
+
+  def generate(source:File, target:File, algorithm:String):Unit =
+      IO write (target, compute(source, algorithm))
+
+  def compute(file:File, algorithm:String):String =
+      hex(raw(file, algorithm))
+
+  def raw(file:File, algorithm:String):Array[Byte]    =
+      (Using fileInputStream file) { is =>
+        val md  = MessageDigest getInstance algorithm
+        val buf = new Array[Byte](bufferSize)
+        md.reset()
+        @tailrec
+        def loop() {
+          val len = is read buf
+          if (len != -1) {
+            md update (buf, 0, len)
+            loop()
+          }
+        }
+        loop()
+        md.digest()
+      }
+
+  def hex(bytes:Array[Byte]):String =
+      bytes map { it => "%02x" format (it.toInt & 0xff) } mkString ""
+}

project/build.properties

@@ -1 +1 @@
-sbt.version=0.13.8
+sbt.version=0.13.9

release/env.sh

@@ -1,3 +1,3 @@
 #!/bin/sh
-export GITBUCKET_VERSION=`cat ../project/build.scala | grep 'val Version' | cut -d \" -f 2`
+export GITBUCKET_VERSION=`cat ../build.sbt | grep 'val GitBucketVersion' | cut -d \" -f 2`
 echo "GITBUCKET_VERSION: $GITBUCKET_VERSION"

release/pom.xml

@@ -10,7 +10,7 @@
             <extension>
                 <groupId>org.apache.maven.wagon</groupId>
                 <artifactId>wagon-ssh</artifactId>
-                <version>1.0-beta-6</version>
+                <version>2.10</version>
             </extension>
         </extensions>
     </build>

sbt.bat

@@ -1,2 +1,2 @@
 set SCRIPT_DIR=%~dp0
-java %JAVA_OPTS% -Dsbt.log.noformat=true -XX:+CMSClassUnloadingEnabled -XX:MaxPermSize=256m -Xmx512M -Xss2M -Xdebug -Xrunjdwp:transport=dt_socket,server=y,suspend=n,address=5005 -jar "%SCRIPT_DIR%\sbt-launch-0.13.8.jar" %*
+java %JAVA_OPTS% -Dsbt.log.noformat=true -XX:+CMSClassUnloadingEnabled -XX:MaxPermSize=256m -Xmx512M -Xss2M -Xdebug -Xrunjdwp:transport=dt_socket,server=y,suspend=n,address=5005 -jar "%SCRIPT_DIR%\sbt-launch-0.13.9.jar" %*

sbt.sh

@@ -1,2 +1,2 @@
 #!/bin/sh
-java $JAVA_OPTS -Dsbt.log.noformat=true -XX:+CMSClassUnloadingEnabled -XX:MaxPermSize=256m -Xmx512M -Xss2M -Xdebug -Xrunjdwp:transport=dt_socket,server=y,suspend=n,address=5005 -jar `dirname $0`/sbt-launch-0.13.8.jar "$@"
+java $JAVA_OPTS -Dsbt.log.noformat=true -XX:+CMSClassUnloadingEnabled -XX:MaxPermSize=256m -Xmx512M -Xss2M -Xdebug -Xrunjdwp:transport=dt_socket,server=y,suspend=n,address=5005 -jar `dirname $0`/sbt-launch-0.13.9.jar "$@"

src/main/java/org/postgresql/Driver2.java

@@ -0,0 +1,52 @@
+package org.postgresql;
+
+import java.lang.reflect.InvocationHandler;
+import java.lang.reflect.Method;
+import java.lang.reflect.Proxy;
+import java.sql.Connection;
+import java.sql.SQLException;
+import java.util.Properties;
+
+/**
+ * Wraps the PostgreSQL JDBC driver to convert the returning column names to lower case.
+ */
+public class Driver2 extends Driver {
+
+    @Override
+    public java.sql.Connection connect(String url, Properties info) throws SQLException {
+        Connection conn =  super.connect(url, info);
+
+        Object proxy = Proxy.newProxyInstance(
+                conn.getClass().getClassLoader(),
+                new Class[]{ Connection.class },
+                new ConnectionProxyHandler(conn)
+        );
+
+        return Connection.class.cast(proxy);
+    }
+
+
+    private static class ConnectionProxyHandler implements InvocationHandler {
+
+        private Connection conn;
+
+        public ConnectionProxyHandler(Connection conn){
+            this.conn = conn;
+        }
+
+        @Override
+        public Object invoke(Object proxy, Method method, Object[] args) throws Throwable {
+            if(method.getName().equals("prepareStatement")){
+                if(args != null && args.length == 2 && args[1].getClass().isArray()){
+                    String[] keys = (String[]) args[1];
+                    for(int i = 0; i < keys.length; i++){
+                        keys[i] = keys[i].toLowerCase();
+                    }
+                }
+            }
+            return method.invoke(conn, args);
+        }
+    }
+
+}
+

src/main/resources/database.conf

@@ -1,6 +0,0 @@
-db {
-  driver = "org.h2.Driver"
-  url = "jdbc:h2:${DatabaseHome};MVCC=true"
-  user = "sa"
-  password = "sa"
-}

src/main/resources/reference.conf

@@ -1,5 +0,0 @@
-c3p0 {
-  privilegeSpawnedThreads=true
-  contextClassLoaderSource=library
-}
-

src/main/resources/update/1_0.sql

@@ -1,135 +0,0 @@
-CREATE TABLE ACCOUNT(
-		USER_NAME VARCHAR(100) NOT NULL,
-		MAIL_ADDRESS VARCHAR(100) NOT NULL,
-		PASSWORD VARCHAR(40) NOT NULL,
-		ADMINISTRATOR BOOLEAN NOT NULL,
-		URL VARCHAR(200),
-		REGISTERED_DATE TIMESTAMP NOT NULL,
-		UPDATED_DATE TIMESTAMP NOT NULL,
-		LAST_LOGIN_DATE TIMESTAMP
-);
-
-CREATE TABLE REPOSITORY(
-		USER_NAME VARCHAR(100) NOT NULL,
-		REPOSITORY_NAME VARCHAR(100) NOT NULL,
-		PRIVATE BOOLEAN NOT NULL,
-		DESCRIPTION TEXT,
-		DEFAULT_BRANCH VARCHAR(100),
-		REGISTERED_DATE TIMESTAMP NOT NULL,
-		UPDATED_DATE TIMESTAMP NOT NULL,
-		LAST_ACTIVITY_DATE TIMESTAMP NOT NULL
-);
-
-CREATE TABLE COLLABORATOR(
-		USER_NAME VARCHAR(100) NOT NULL,
-		REPOSITORY_NAME VARCHAR(100) NOT NULL,
-		COLLABORATOR_NAME VARCHAR(100) NOT NULL
-);
-
-CREATE TABLE ISSUE(
-		USER_NAME VARCHAR(100) NOT NULL,
-		REPOSITORY_NAME VARCHAR(100) NOT NULL,
-		ISSUE_ID INT NOT NULL,
-		OPENED_USER_NAME VARCHAR(100) NOT NULL,
-		MILESTONE_ID INT,
-		ASSIGNED_USER_NAME VARCHAR(100),
-		TITLE TEXT NOT NULL,
-		CONTENT TEXT,
-		CLOSED BOOLEAN NOT NULL,
-		REGISTERED_DATE TIMESTAMP NOT NULL,
-		UPDATED_DATE TIMESTAMP NOT NULL
-);
-
-CREATE TABLE ISSUE_ID(
-		USER_NAME VARCHAR(100) NOT NULL,
-		REPOSITORY_NAME VARCHAR(100) NOT NULL,
-		ISSUE_ID INT NOT NULL
-);
-
-CREATE TABLE ISSUE_COMMENT(
-		USER_NAME VARCHAR(100) NOT NULL,
-		REPOSITORY_NAME VARCHAR(100) NOT NULL,
-		ISSUE_ID INT NOT NULL,
-		COMMENT_ID INT AUTO_INCREMENT,
-		ACTION VARCHAR(10),
-		COMMENTED_USER_NAME VARCHAR(100) NOT NULL,
-		CONTENT TEXT NOT NULL,
-		REGISTERED_DATE TIMESTAMP NOT NULL,
-		UPDATED_DATE TIMESTAMP NOT NULL
-);
-
-CREATE TABLE LABEL(
-		USER_NAME VARCHAR(100) NOT NULL,
-		REPOSITORY_NAME VARCHAR(100) NOT NULL,
-		LABEL_ID INT AUTO_INCREMENT,
-		LABEL_NAME VARCHAR(100) NOT NULL,
-		COLOR CHAR(6) NOT NULL
-);
-
-CREATE TABLE ISSUE_LABEL(
-		USER_NAME VARCHAR(100) NOT NULL,
-		REPOSITORY_NAME VARCHAR(100) NOT NULL,
-		ISSUE_ID INT NOT NULL,
-		LABEL_ID INT NOT NULL
-);
-
-CREATE TABLE MILESTONE(
-		USER_NAME VARCHAR(100) NOT NULL,
-		REPOSITORY_NAME VARCHAR(100) NOT NULL,
-		MILESTONE_ID INT AUTO_INCREMENT,
-		TITLE VARCHAR(100) NOT NULL,
-		DESCRIPTION TEXT,
-		DUE_DATE TIMESTAMP,
-		CLOSED_DATE TIMESTAMP
-);
-
-ALTER TABLE ACCOUNT ADD CONSTRAINT IDX_ACCOUNT_PK PRIMARY KEY (USER_NAME);
-ALTER TABLE ACCOUNT ADD CONSTRAINT IDX_ACCOUNT_1 UNIQUE (MAIL_ADDRESS);
-
-ALTER TABLE REPOSITORY ADD CONSTRAINT IDX_REPOSITORY_PK PRIMARY KEY (USER_NAME, REPOSITORY_NAME);
-ALTER TABLE REPOSITORY ADD CONSTRAINT IDX_REPOSITORY_FK0 FOREIGN KEY (USER_NAME) REFERENCES ACCOUNT (USER_NAME);
-
-ALTER TABLE COLLABORATOR ADD CONSTRAINT IDX_COLLABORATOR_PK PRIMARY KEY (USER_NAME, REPOSITORY_NAME);
-ALTER TABLE COLLABORATOR ADD CONSTRAINT IDX_COLLABORATOR_FK0 FOREIGN KEY (USER_NAME, REPOSITORY_NAME) REFERENCES REPOSITORY (USER_NAME, REPOSITORY_NAME);
-ALTER TABLE COLLABORATOR ADD CONSTRAINT IDX_COLLABORATOR_FK1 FOREIGN KEY (COLLABORATOR_NAME) REFERENCES ACCOUNT (USER_NAME);
-
-ALTER TABLE ISSUE ADD CONSTRAINT IDX_ISSUE_PK PRIMARY KEY (ISSUE_ID, USER_NAME, REPOSITORY_NAME);
-ALTER TABLE ISSUE ADD CONSTRAINT IDX_ISSUE_FK0 FOREIGN KEY (USER_NAME, REPOSITORY_NAME) REFERENCES REPOSITORY (USER_NAME, REPOSITORY_NAME);
-ALTER TABLE ISSUE ADD CONSTRAINT IDX_ISSUE_FK1 FOREIGN KEY (OPENED_USER_NAME) REFERENCES ACCOUNT (USER_NAME);
-ALTER TABLE ISSUE ADD CONSTRAINT IDX_ISSUE_FK2 FOREIGN KEY (MILESTONE_ID) REFERENCES MILESTONE (MILESTONE_ID);
-
-ALTER TABLE ISSUE_ID ADD CONSTRAINT IDX_ISSUE_ID_PK PRIMARY KEY (USER_NAME, REPOSITORY_NAME);
-ALTER TABLE ISSUE_ID ADD CONSTRAINT IDX_ISSUE_ID_FK1 FOREIGN KEY (USER_NAME, REPOSITORY_NAME) REFERENCES REPOSITORY (USER_NAME, REPOSITORY_NAME);
-
-ALTER TABLE ISSUE_COMMENT ADD CONSTRAINT IDX_ISSUE_COMMENT_PK PRIMARY KEY (COMMENT_ID);
-ALTER TABLE ISSUE_COMMENT ADD CONSTRAINT IDX_ISSUE_COMMENT_1 UNIQUE (USER_NAME, REPOSITORY_NAME, ISSUE_ID, COMMENT_ID);
-ALTER TABLE ISSUE_COMMENT ADD CONSTRAINT IDX_ISSUE_COMMENT_FK0 FOREIGN KEY (USER_NAME, REPOSITORY_NAME, ISSUE_ID) REFERENCES ISSUE (USER_NAME, REPOSITORY_NAME, ISSUE_ID);
-
-ALTER TABLE LABEL ADD CONSTRAINT IDX_LABEL_PK PRIMARY KEY (USER_NAME, REPOSITORY_NAME, LABEL_ID);
-ALTER TABLE LABEL ADD CONSTRAINT IDX_LABEL_FK0 FOREIGN KEY (USER_NAME, REPOSITORY_NAME) REFERENCES REPOSITORY (USER_NAME, REPOSITORY_NAME);
-
-ALTER TABLE ISSUE_LABEL ADD CONSTRAINT IDX_ISSUE_LABEL_PK PRIMARY KEY (USER_NAME, REPOSITORY_NAME, ISSUE_ID, LABEL_ID);
-ALTER TABLE ISSUE_LABEL ADD CONSTRAINT IDX_ISSUE_LABEL_FK0 FOREIGN KEY (USER_NAME, REPOSITORY_NAME, ISSUE_ID) REFERENCES ISSUE (USER_NAME, REPOSITORY_NAME, ISSUE_ID);
-
-ALTER TABLE MILESTONE ADD CONSTRAINT IDX_MILESTONE_PK PRIMARY KEY (USER_NAME, REPOSITORY_NAME, MILESTONE_ID);
-ALTER TABLE MILESTONE ADD CONSTRAINT IDX_MILESTONE_FK0 FOREIGN KEY (USER_NAME, REPOSITORY_NAME) REFERENCES REPOSITORY (USER_NAME, REPOSITORY_NAME);
-
-INSERT INTO ACCOUNT (
-  USER_NAME,
-  MAIL_ADDRESS,
-  PASSWORD,
-  ADMINISTRATOR,
-  URL,
-  REGISTERED_DATE,
-  UPDATED_DATE,
-  LAST_LOGIN_DATE
-) VALUES (
-  'root',
-  'root@localhost',
-  'dc76e9f0c0006e8f919e0c515c66dbba3982f785',
-  true,
-  'https://github.com/gitbucket/gitbucket',
-  SYSDATE,
-  SYSDATE,
-  NULL
-);

src/main/resources/update/1_1.sql

@@ -1,8 +0,0 @@
--- Fix COLLABORATOR constraints
-ALTER TABLE COLLABORATOR DROP CONSTRAINT IDX_COLLABORATOR_FK1 IF EXISTS;
-ALTER TABLE COLLABORATOR DROP CONSTRAINT IDX_COLLABORATOR_FK0 IF EXISTS;
-ALTER TABLE COLLABORATOR DROP CONSTRAINT IDX_COLLABORATOR_PK IF EXISTS;
-
-ALTER TABLE COLLABORATOR ADD CONSTRAINT IDX_COLLABORATOR_PK PRIMARY KEY (USER_NAME, REPOSITORY_NAME, COLLABORATOR_NAME);
-ALTER TABLE COLLABORATOR ADD CONSTRAINT IDX_COLLABORATOR_FK0 FOREIGN KEY (USER_NAME, REPOSITORY_NAME) REFERENCES REPOSITORY (USER_NAME, REPOSITORY_NAME);
-ALTER TABLE COLLABORATOR ADD CONSTRAINT IDX_COLLABORATOR_FK1 FOREIGN KEY (COLLABORATOR_NAME) REFERENCES ACCOUNT (USER_NAME);

src/main/resources/update/1_12.sql

@@ -1,11 +0,0 @@
-ALTER TABLE GROUP_MEMBER ADD COLUMN MANAGER BOOLEAN DEFAULT FALSE;
-
-CREATE TABLE SSH_KEY (
-  USER_NAME VARCHAR(100) NOT NULL,
-  SSH_KEY_ID INT AUTO_INCREMENT,
-  TITLE VARCHAR(100) NOT NULL,
-  PUBLIC_KEY TEXT NOT NULL
-);
-
-ALTER TABLE SSH_KEY ADD CONSTRAINT IDX_SSH_KEY_PK PRIMARY KEY (USER_NAME, SSH_KEY_ID);
-ALTER TABLE SSH_KEY ADD CONSTRAINT IDX_SSH_KEY_FK0 FOREIGN KEY (USER_NAME) REFERENCES ACCOUNT (USER_NAME);

src/main/resources/update/1_13.sql

@@ -1 +0,0 @@
-DROP TABLE COMMIT_LOG;

src/main/resources/update/1_2.sql

@@ -1,24 +0,0 @@
-CREATE TABLE ACTIVITY(
-		ACTIVITY_ID INT AUTO_INCREMENT,
-		USER_NAME VARCHAR(100) NOT NULL,
-		REPOSITORY_NAME VARCHAR(100) NOT NULL,
-		ACTIVITY_USER_NAME VARCHAR(100) NOT NULL,
-		ACTIVITY_TYPE VARCHAR(100) NOT NULL,
-		MESSAGE TEXT NOT NULL,
-		ADDITIONAL_INFO TEXT,
-		ACTIVITY_DATE TIMESTAMP NOT NULL
-);
-
-CREATE TABLE COMMIT_LOG (
-		USER_NAME VARCHAR(100) NOT NULL,
-		REPOSITORY_NAME VARCHAR(100) NOT NULL,
-		COMMIT_ID VARCHAR(40) NOT NULL
-);
-
-ALTER TABLE ACTIVITY ADD CONSTRAINT IDX_ACTIVITY_PK PRIMARY KEY (ACTIVITY_ID);
-ALTER TABLE ACTIVITY ADD CONSTRAINT IDX_ACTIVITY_FK0 FOREIGN KEY (USER_NAME, REPOSITORY_NAME) REFERENCES REPOSITORY (USER_NAME, REPOSITORY_NAME);
-ALTER TABLE ACTIVITY ADD CONSTRAINT IDX_ACTIVITY_FK1 FOREIGN KEY (ACTIVITY_USER_NAME) REFERENCES ACCOUNT (USER_NAME);
-
-ALTER TABLE COMMIT_LOG ADD CONSTRAINT IDX_COMMIT_LOG_PK PRIMARY KEY (USER_NAME, REPOSITORY_NAME, COMMIT_ID);
-ALTER TABLE COMMIT_LOG ADD CONSTRAINT IDX_COMMIT_LOG_FK0 FOREIGN KEY (USER_NAME, REPOSITORY_NAME) REFERENCES REPOSITORY (USER_NAME, REPOSITORY_NAME);
-

src/main/resources/update/1_3.sql

@@ -1,8 +0,0 @@
-ALTER TABLE ACCOUNT ADD COLUMN IMAGE VARCHAR(100);
-
-UPDATE ISSUE_COMMENT SET ACTION = 'comment' WHERE ACTION IS NULL;
-
-ALTER TABLE ISSUE_COMMENT ALTER COLUMN ACTION VARCHAR(20) NOT NULL;
-
-UPDATE ISSUE_COMMENT SET ACTION = 'close_comment'  WHERE ACTION = 'close';
-UPDATE ISSUE_COMMENT SET ACTION = 'reopen_comment' WHERE ACTION = 'reopen';

src/main/resources/update/1_4.sql

@@ -1,24 +0,0 @@
-CREATE TABLE GROUP_MEMBER(
-  GROUP_NAME VARCHAR(100) NOT NULL,
-  USER_NAME  VARCHAR(100) NOT NULL
-);
-
-ALTER TABLE GROUP_MEMBER ADD CONSTRAINT IDX_GROUP_MEMBER_PK PRIMARY KEY (GROUP_NAME, USER_NAME);
-ALTER TABLE GROUP_MEMBER ADD CONSTRAINT IDX_GROUP_MEMBER_FK0 FOREIGN KEY (GROUP_NAME) REFERENCES ACCOUNT (USER_NAME);
-ALTER TABLE GROUP_MEMBER ADD CONSTRAINT IDX_GROUP_MEMBER_FK1 FOREIGN KEY (USER_NAME) REFERENCES ACCOUNT (USER_NAME);
-
-ALTER TABLE ACCOUNT ADD COLUMN GROUP_ACCOUNT BOOLEAN NOT NULL DEFAULT FALSE;
-
-CREATE OR REPLACE VIEW ISSUE_OUTLINE_VIEW AS
- SELECT
-   A.USER_NAME,
-   A.REPOSITORY_NAME,
-   A.ISSUE_ID,
-   NVL(B.COMMENT_COUNT, 0) AS COMMENT_COUNT
- FROM ISSUE A
- LEFT OUTER JOIN (
-   SELECT USER_NAME, REPOSITORY_NAME, ISSUE_ID, COUNT(COMMENT_ID) AS COMMENT_COUNT FROM ISSUE_COMMENT
-   WHERE ACTION IN ('comment', 'close_comment', 'reopen_comment')
-   GROUP BY USER_NAME, REPOSITORY_NAME, ISSUE_ID
- ) B
- ON (A.USER_NAME = B.USER_NAME AND A.REPOSITORY_NAME = B.REPOSITORY_NAME AND A.ISSUE_ID = B.ISSUE_ID);

src/main/resources/update/1_5.sql

@@ -1,21 +0,0 @@
-ALTER TABLE REPOSITORY ADD COLUMN ORIGIN_USER_NAME VARCHAR(100);
-ALTER TABLE REPOSITORY ADD COLUMN ORIGIN_REPOSITORY_NAME VARCHAR(100);
-ALTER TABLE REPOSITORY ADD COLUMN PARENT_USER_NAME VARCHAR(100);
-ALTER TABLE REPOSITORY ADD COLUMN PARENT_REPOSITORY_NAME VARCHAR(100);
-
-CREATE TABLE PULL_REQUEST(
-		USER_NAME VARCHAR(100) NOT NULL,
-		REPOSITORY_NAME VARCHAR(100) NOT NULL,
-		ISSUE_ID INT NOT NULL,
-		BRANCH VARCHAR(100) NOT NULL,
-		REQUEST_USER_NAME VARCHAR(100) NOT NULL,
-		REQUEST_REPOSITORY_NAME VARCHAR(100) NOT NULL,
-		REQUEST_BRANCH VARCHAR(100) NOT NULL,
-		COMMIT_ID_FROM VARCHAR(40) NOT NULL,
-		COMMIT_ID_TO VARCHAR(40) NOT NULL
-);
-
-ALTER TABLE PULL_REQUEST ADD CONSTRAINT IDX_PULL_REQUEST_PK PRIMARY KEY (USER_NAME, REPOSITORY_NAME, ISSUE_ID);
-ALTER TABLE PULL_REQUEST ADD CONSTRAINT IDX_PULL_REQUEST_FK0 FOREIGN KEY (USER_NAME, REPOSITORY_NAME, ISSUE_ID) REFERENCES ISSUE (USER_NAME, REPOSITORY_NAME, ISSUE_ID);
-
-ALTER TABLE ISSUE ADD COLUMN PULL_REQUEST BOOLEAN NOT NULL DEFAULT FALSE;

src/main/resources/update/1_6.sql

@@ -1,8 +0,0 @@
-CREATE TABLE WEB_HOOK (
-		USER_NAME VARCHAR(100) NOT NULL,
-		REPOSITORY_NAME VARCHAR(100) NOT NULL,
-		URL VARCHAR(200) NOT NULL
-);
-
-ALTER TABLE WEB_HOOK ADD CONSTRAINT IDX_WEB_HOOK_PK PRIMARY KEY (USER_NAME, REPOSITORY_NAME, URL);
-ALTER TABLE WEB_HOOK ADD CONSTRAINT IDX_WEB_HOOK_FK0 FOREIGN KEY (USER_NAME, REPOSITORY_NAME) REFERENCES REPOSITORY (USER_NAME, REPOSITORY_NAME);

src/main/resources/update/1_7.sql

@@ -1,5 +0,0 @@
-ALTER TABLE ACCOUNT ADD COLUMN FULL_NAME VARCHAR(100);
-
-UPDATE ACCOUNT SET FULL_NAME = USER_NAME WHERE FULL_NAME IS NULL;
-
-ALTER TABLE ACCOUNT ALTER COLUMN FULL_NAME SET NOT NULL;

src/main/resources/update/1_8.sql

@@ -1 +0,0 @@
-ALTER TABLE ACCOUNT ADD COLUMN REMOVED BOOLEAN DEFAULT FALSE;

src/main/resources/update/2_3.sql

@@ -1,6 +0,0 @@
-CREATE TABLE PLUGIN (
-  PLUGIN_ID VARCHAR(100) NOT NULL,
-  VERSION   VARCHAR(100) NOT NULL
-);
-
-ALTER TABLE PLUGIN ADD CONSTRAINT IDX_PLUGIN_PK PRIMARY KEY (PLUGIN_ID);

src/main/resources/update/2_7.sql

@@ -1,18 +0,0 @@
-CREATE TABLE COMMIT_COMMENT (
-    USER_NAME VARCHAR(100) NOT NULL,
-    REPOSITORY_NAME VARCHAR(100) NOT NULL,
-    COMMIT_ID VARCHAR(100) NOT NULL,
-    COMMENT_ID INT AUTO_INCREMENT,
-    COMMENTED_USER_NAME VARCHAR(100) NOT NULL,
-    CONTENT TEXT NOT NULL,
-    FILE_NAME NVARCHAR(100),
-    OLD_LINE_NUMBER INT,
-    NEW_LINE_NUMBER INT,
-    REGISTERED_DATE TIMESTAMP NOT NULL,
-    UPDATED_DATE TIMESTAMP NOT NULL,
-    PULL_REQUEST BOOLEAN NOT NULL
-);
-
-ALTER TABLE COMMIT_COMMENT ADD CONSTRAINT IDX_COMMIT_COMMENT_PK PRIMARY KEY (COMMENT_ID);
-ALTER TABLE COMMIT_COMMENT ADD CONSTRAINT IDX_COMMIT_COMMENT_FK0 FOREIGN KEY (USER_NAME, REPOSITORY_NAME) REFERENCES REPOSITORY (USER_NAME, REPOSITORY_NAME);
-ALTER TABLE COMMIT_COMMENT ADD CONSTRAINT IDX_COMMIT_COMMENT_1 UNIQUE (USER_NAME, REPOSITORY_NAME, COMMIT_ID, COMMENT_ID);

src/main/resources/update/2_8.sql

@@ -1 +0,0 @@
-ALTER TABLE COMMIT_COMMENT ALTER COLUMN FILE_NAME NVARCHAR(260);

src/main/resources/update/3_1.sql

@@ -1,42 +0,0 @@
-DROP TABLE IF EXISTS ACCESS_TOKEN;
-
-CREATE TABLE ACCESS_TOKEN (
-   ACCESS_TOKEN_ID INT NOT NULL AUTO_INCREMENT,
-   TOKEN_HASH VARCHAR(40) NOT NULL,
-   USER_NAME VARCHAR(100) NOT NULL,
-   NOTE TEXT NOT NULL
-);
-
-ALTER TABLE ACCESS_TOKEN ADD CONSTRAINT IDX_ACCESS_TOKEN_PK PRIMARY KEY (ACCESS_TOKEN_ID);
-ALTER TABLE ACCESS_TOKEN ADD CONSTRAINT IDX_ACCESS_TOKEN_FK0 FOREIGN KEY (USER_NAME) REFERENCES ACCOUNT (USER_NAME)
-  ON DELETE CASCADE ON UPDATE CASCADE;
-ALTER TABLE ACCESS_TOKEN ADD CONSTRAINT IDX_ACCESS_TOKEN_TOKEN_HASH UNIQUE(TOKEN_HASH);
-
-
-DROP TABLE IF EXISTS COMMIT_STATUS;
-CREATE TABLE COMMIT_STATUS(
-  COMMIT_STATUS_ID INT AUTO_INCREMENT,
-  USER_NAME VARCHAR(100) NOT NULL,
-  REPOSITORY_NAME VARCHAR(100) NOT NULL,
-  COMMIT_ID VARCHAR(40) NOT NULL,
-  CONTEXT VARCHAR(255) NOT NULL, -- context is too long (maximum is 255 characters)
-  STATE VARCHAR(10) NOT NULL, -- pending, success, error, or failure
-  TARGET_URL VARCHAR(200),
-  DESCRIPTION TEXT,
-  CREATOR VARCHAR(100) NOT NULL,
-  REGISTERED_DATE TIMESTAMP NOT NULL, -- CREATED_AT
-  UPDATED_DATE TIMESTAMP NOT NULL -- UPDATED_AT
-);
-ALTER TABLE COMMIT_STATUS ADD CONSTRAINT IDX_COMMIT_STATUS_PK PRIMARY KEY (COMMIT_STATUS_ID);
-ALTER TABLE COMMIT_STATUS ADD CONSTRAINT IDX_COMMIT_STATUS_1
-  UNIQUE (USER_NAME, REPOSITORY_NAME, COMMIT_ID, CONTEXT);
-ALTER TABLE COMMIT_STATUS ADD CONSTRAINT IDX_COMMIT_STATUS_FK1
-  FOREIGN KEY (USER_NAME, REPOSITORY_NAME)
-  REFERENCES REPOSITORY (USER_NAME, REPOSITORY_NAME)
-  ON DELETE CASCADE ON UPDATE CASCADE;
-ALTER TABLE COMMIT_STATUS ADD CONSTRAINT IDX_COMMIT_STATUS_FK2
-  FOREIGN KEY (USER_NAME) REFERENCES ACCOUNT (USER_NAME)
-  ON DELETE CASCADE ON UPDATE CASCADE;
-ALTER TABLE COMMIT_STATUS ADD CONSTRAINT IDX_COMMIT_STATUS_FK3
-  FOREIGN KEY (CREATOR) REFERENCES ACCOUNT (USER_NAME)
-  ON DELETE CASCADE ON UPDATE CASCADE;

src/main/resources/update/3_11.sql

@@ -1,25 +0,0 @@
-DROP TABLE IF EXISTS PROTECTED_BRANCH;
-
-CREATE TABLE PROTECTED_BRANCH(
-    USER_NAME VARCHAR(100) NOT NULL,
-    REPOSITORY_NAME VARCHAR(100) NOT NULL,
-    BRANCH VARCHAR(100) NOT NULL,
-    STATUS_CHECK_ADMIN BOOLEAN NOT NULL DEFAULT false
-);
-
-ALTER TABLE PROTECTED_BRANCH ADD CONSTRAINT IDX_PROTECTED_BRANCH_PK PRIMARY KEY (USER_NAME, REPOSITORY_NAME, BRANCH);
-ALTER TABLE PROTECTED_BRANCH ADD CONSTRAINT IDX_PROTECTED_BRANCH_FK0 FOREIGN KEY (USER_NAME, REPOSITORY_NAME) REFERENCES REPOSITORY (USER_NAME, REPOSITORY_NAME)
-  ON DELETE CASCADE ON UPDATE CASCADE;
-
-
-DROP TABLE IF EXISTS PROTECTED_BRANCH_REQUIRE_CONTEXT;
-CREATE TABLE PROTECTED_BRANCH_REQUIRE_CONTEXT(
-    USER_NAME VARCHAR(100) NOT NULL,
-    REPOSITORY_NAME VARCHAR(100) NOT NULL,
-    BRANCH VARCHAR(100) NOT NULL,
-    CONTEXT VARCHAR(255) NOT NULL
-);
-
-ALTER TABLE PROTECTED_BRANCH_REQUIRE_CONTEXT ADD CONSTRAINT IDX_PROTECTED_BRANCH_REQUIRE_CONTEXT_PK PRIMARY KEY (USER_NAME, REPOSITORY_NAME, BRANCH, CONTEXT);
-ALTER TABLE PROTECTED_BRANCH_REQUIRE_CONTEXT ADD CONSTRAINT IDX_PROTECTED_BRANCH_REQUIRE_CONTEXT_FK0 FOREIGN KEY (USER_NAME, REPOSITORY_NAME, BRANCH) REFERENCES PROTECTED_BRANCH (USER_NAME, REPOSITORY_NAME, BRANCH)
-  ON DELETE CASCADE ON UPDATE CASCADE;

src/main/resources/update/3_9.sql

@@ -1,55 +0,0 @@
-DROP TABLE IF EXISTS WEB_HOOK_EVENT;
-
-CREATE TABLE WEB_HOOK_EVENT(
-    USER_NAME VARCHAR(100) NOT NULL,
-    REPOSITORY_NAME VARCHAR(100) NOT NULL,
-    URL VARCHAR(200) NOT NULL,
-    EVENT VARCHAR(30) NOT NULL
-);
-
-ALTER TABLE WEB_HOOK_EVENT ADD CONSTRAINT IDX_WEB_HOOK_EVENT_PK PRIMARY KEY (USER_NAME, REPOSITORY_NAME, URL, EVENT);
-ALTER TABLE WEB_HOOK_EVENT ADD CONSTRAINT IDX_WEB_HOOK_EVENT_FK0 FOREIGN KEY (USER_NAME, REPOSITORY_NAME, URL) REFERENCES WEB_HOOK (USER_NAME, REPOSITORY_NAME, URL)
-  ON DELETE CASCADE ON UPDATE CASCADE;
-
-CREATE TEMPORARY TABLE TMP_EVENTS (EVENT VARCHAR(30));
-
-INSERT INTO TMP_EVENTS VALUES ('push'),('issue_comment'),('issues'),('pull_request');
-
-INSERT INTO WEB_HOOK_EVENT (USER_NAME, REPOSITORY_NAME, URL, EVENT)
-  SELECT USER_NAME, REPOSITORY_NAME, URL, EVENT
-    FROM WEB_HOOK, TMP_EVENTS;
-
-DROP TABLE TMP_EVENTS;
-
-ALTER TABLE COMMIT_COMMENT ADD COLUMN ISSUE_ID INT;
-
-CREATE OR REPLACE VIEW ISSUE_OUTLINE_VIEW AS
- SELECT
-   A.USER_NAME,
-   A.REPOSITORY_NAME,
-   A.ISSUE_ID,
-   NVL(B.COMMENT_COUNT, 0) + NVL(C.COMMENT_COUNT, 0) AS COMMENT_COUNT
- FROM ISSUE A
- LEFT OUTER JOIN (
-   SELECT USER_NAME, REPOSITORY_NAME, ISSUE_ID, COUNT(COMMENT_ID) AS COMMENT_COUNT FROM ISSUE_COMMENT
-   WHERE ACTION IN ('comment', 'close_comment', 'reopen_comment')
-   GROUP BY USER_NAME, REPOSITORY_NAME, ISSUE_ID
- ) B
- ON (A.USER_NAME = B.USER_NAME AND A.REPOSITORY_NAME = B.REPOSITORY_NAME AND A.ISSUE_ID = B.ISSUE_ID)
- LEFT OUTER JOIN (
-   SELECT USER_NAME, REPOSITORY_NAME, ISSUE_ID, COUNT(COMMENT_ID) AS COMMENT_COUNT FROM COMMIT_COMMENT
-   GROUP BY USER_NAME, REPOSITORY_NAME, ISSUE_ID
- ) C
- ON (A.USER_NAME = C.USER_NAME AND A.REPOSITORY_NAME = C.REPOSITORY_NAME AND A.ISSUE_ID = C.ISSUE_ID);
-
-
-UPDATE COMMIT_COMMENT C SET (ISSUE_ID) = (
-  SELECT MAX(P.ISSUE_ID)
-  FROM PULL_REQUEST P
-  WHERE
-    C.USER_NAME       = P.USER_NAME AND
-    C.REPOSITORY_NAME = P.REPOSITORY_NAME AND
-    C.COMMIT_ID       = P.COMMIT_ID_TO
-);
-
-ALTER TABLE COMMIT_COMMENT DROP COLUMN PULL_REQUEST;

src/main/resources/update/gitbucket-core_4.0.sql

@@ -0,0 +1,18 @@
+CREATE OR REPLACE VIEW ISSUE_OUTLINE_VIEW AS
+ SELECT
+   A.USER_NAME,
+   A.REPOSITORY_NAME,
+   A.ISSUE_ID,
+   COALESCE(B.COMMENT_COUNT, 0) + COALESCE(C.COMMENT_COUNT, 0) AS COMMENT_COUNT
+ FROM ISSUE A
+ LEFT OUTER JOIN (
+   SELECT USER_NAME, REPOSITORY_NAME, ISSUE_ID, COUNT(COMMENT_ID) AS COMMENT_COUNT FROM ISSUE_COMMENT
+   WHERE ACTION IN ('comment', 'close_comment', 'reopen_comment')
+   GROUP BY USER_NAME, REPOSITORY_NAME, ISSUE_ID
+ ) B
+ ON (A.USER_NAME = B.USER_NAME AND A.REPOSITORY_NAME = B.REPOSITORY_NAME AND A.ISSUE_ID = B.ISSUE_ID)
+ LEFT OUTER JOIN (
+   SELECT USER_NAME, REPOSITORY_NAME, ISSUE_ID, COUNT(COMMENT_ID) AS COMMENT_COUNT FROM COMMIT_COMMENT
+   GROUP BY USER_NAME, REPOSITORY_NAME, ISSUE_ID
+ ) C
+ ON (A.USER_NAME = C.USER_NAME AND A.REPOSITORY_NAME = C.REPOSITORY_NAME AND A.ISSUE_ID = C.ISSUE_ID);

src/main/resources/update/gitbucket-core_4.0.xml

@@ -0,0 +1,351 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<changeSet>
+
+  <!--================================================================================================-->
+  <!-- ACCOUNT -->
+  <!--================================================================================================-->
+  <createTable tableName="ACCOUNT">
+    <column name="USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="MAIL_ADDRESS" type="varchar(100)" nullable="false"/>
+    <column name="PASSWORD" type="varchar(40)" nullable="false"/>
+    <column name="ADMINISTRATOR" type="boolean" nullable="false"/>
+    <column name="URL" type="varchar(200)" nullable="true"/>
+    <column name="REGISTERED_DATE" type="datetime" nullable="false"/>
+    <column name="UPDATED_DATE" type="datetime" nullable="false"/>
+    <column name="LAST_LOGIN_DATE" type="datetime" nullable="true"/>
+    <column name="IMAGE" type="varchar(100)" nullable="true"/>
+    <column name="GROUP_ACCOUNT" type="boolean" nullable="false"/>
+    <column name="FULL_NAME" type="varchar(100)" nullable="false"/>
+    <column name="REMOVED" type="boolean" nullable="true"/>
+  </createTable>
+
+  <addPrimaryKey constraintName="IDX_ACCOUNT_PK" tableName="ACCOUNT" columnNames="USER_NAME"/>
+  <addUniqueConstraint constraintName="IDX_ACCOUNT_1" tableName="ACCOUNT" columnNames="MAIL_ADDRESS"/>
+
+  <insert tableName="ACCOUNT">
+    <column name="USER_NAME" value="root"/>
+    <column name="FULL_NAME" value="root"/>
+    <column name="MAIL_ADDRESS" value="root@localhost"/>
+    <column name="PASSWORD" value="dc76e9f0c0006e8f919e0c515c66dbba3982f785"/>
+    <column name="ADMINISTRATOR" valueBoolean="true"/>
+    <column name="URL" value="https://github.com/gitbucket/gitbucket"/>
+    <column name="GROUP_ACCOUNT" valueBoolean="false"/>
+    <column name="REMOVED" valueBoolean="false"/>
+    <column name="REGISTERED_DATE" valueDate="${currentDateTime}"/>
+    <column name="UPDATED_DATE" valueDate="${currentDateTime}"/>
+  </insert>
+
+  <!--================================================================================================-->
+  <!-- REPOSITORY -->
+  <!--================================================================================================-->
+  <createTable tableName="REPOSITORY">
+    <column name="USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="REPOSITORY_NAME" type="varchar(100)" nullable="false"/>
+    <column name="PRIVATE" type="boolean" nullable="false"/>
+    <column name="DESCRIPTION" type="text" nullable="true"/>
+    <column name="DEFAULT_BRANCH" type="varchar(100)" nullable="true"/>
+    <column name="REGISTERED_DATE" type="datetime" nullable="false"/>
+    <column name="UPDATED_DATE" type="datetime" nullable="false"/>
+    <column name="LAST_ACTIVITY_DATE" type="datetime" nullable="false"/>
+    <column name="ORIGIN_USER_NAME" type="varchar(100)" nullable="true"/>
+    <column name="ORIGIN_REPOSITORY_NAME" type="varchar(100)" nullable="true"/>
+    <column name="PARENT_USER_NAME" type="varchar(100)" nullable="true"/>
+    <column name="PARENT_REPOSITORY_NAME" type="varchar(100)" nullable="true"/>
+  </createTable>
+
+  <addPrimaryKey constraintName="IDX_REPOSITORY_PK" tableName="REPOSITORY" columnNames="USER_NAME, REPOSITORY_NAME"/>
+  <addForeignKeyConstraint constraintName="IDX_REPOSITORY_FK0" baseTableName="REPOSITORY" baseColumnNames="USER_NAME" referencedTableName="ACCOUNT" referencedColumnNames="USER_NAME"/>
+
+  <!--================================================================================================-->
+  <!-- ACCESS_TOKEN -->
+  <!--================================================================================================-->
+  <createTable tableName="ACCESS_TOKEN">
+    <column name="ACCESS_TOKEN_ID" type="int" nullable="false" autoIncrement="true" unique="true"/>
+    <column name="TOKEN_HASH" type="varchar(40)" nullable="false"/>
+    <column name="USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="NOTE" type="text" nullable="false"/>
+  </createTable>
+
+  <addPrimaryKey constraintName="IDX_ACCESS_TOKEN_PK" tableName="ACCESS_TOKEN" columnNames="ACCESS_TOKEN_ID"/>
+  <addUniqueConstraint constraintName="IDX_ACCESS_TOKEN_TOKEN_HASH" tableName="ACCESS_TOKEN" columnNames="TOKEN_HASH"/>
+  <addForeignKeyConstraint constraintName="IDX_ACCESS_TOKEN_FK0" baseTableName="ACCESS_TOKEN" baseColumnNames="USER_NAME" referencedTableName="ACCOUNT" referencedColumnNames="USER_NAME" onDelete="CASCADE" onUpdate="CASCADE"/>
+
+  <!--================================================================================================-->
+  <!-- ACTIVITY -->
+  <!--================================================================================================-->
+  <createTable tableName="ACTIVITY">
+    <column name="ACTIVITY_ID" type="int" nullable="false" autoIncrement="true" unique="true"/>
+    <column name="USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="REPOSITORY_NAME" type="varchar(100)" nullable="false"/>
+    <column name="ACTIVITY_USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="ACTIVITY_TYPE" type="varchar(100)" nullable="false"/>
+    <column name="MESSAGE" type="text" nullable="false"/>
+    <column name="ADDITIONAL_INFO" type="text" nullable="true"/>
+    <column name="ACTIVITY_DATE" type="datetime" nullable="false"/>
+  </createTable>
+
+  <addPrimaryKey constraintName="IDX_ACTIVITY_PK" tableName="ACTIVITY" columnNames="ACTIVITY_ID"/>
+  <addForeignKeyConstraint constraintName="IDX_ACTIVITY_FK1" baseTableName="ACTIVITY" baseColumnNames="ACTIVITY_USER_NAME" referencedTableName="ACCOUNT" referencedColumnNames="USER_NAME"/>
+  <addForeignKeyConstraint constraintName="IDX_ACTIVITY_FK0" baseTableName="ACTIVITY" baseColumnNames="USER_NAME, REPOSITORY_NAME" referencedTableName="REPOSITORY" referencedColumnNames="USER_NAME, REPOSITORY_NAME"/>
+
+  <!--================================================================================================-->
+  <!-- COLLABORATOR -->
+  <!--================================================================================================-->
+  <createTable tableName="COLLABORATOR">
+    <column name="USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="REPOSITORY_NAME" type="varchar(100)" nullable="false"/>
+    <column name="COLLABORATOR_NAME" type="varchar(100)" nullable="false"/>
+  </createTable>
+
+  <addPrimaryKey constraintName="IDX_COLLABORATOR_PK" tableName="COLLABORATOR" columnNames="USER_NAME, REPOSITORY_NAME, COLLABORATOR_NAME"/>
+  <addForeignKeyConstraint constraintName="IDX_COLLABORATOR_FK1" baseTableName="COLLABORATOR" baseColumnNames="COLLABORATOR_NAME" referencedTableName="ACCOUNT" referencedColumnNames="USER_NAME"/>
+  <addForeignKeyConstraint constraintName="IDX_COLLABORATOR_FK0" baseTableName="COLLABORATOR" baseColumnNames="USER_NAME, REPOSITORY_NAME" referencedTableName="REPOSITORY" referencedColumnNames="USER_NAME, REPOSITORY_NAME"/>
+
+  <!--================================================================================================-->
+  <!-- COMMIT_COMMENT -->
+  <!--================================================================================================-->
+  <createTable tableName="COMMIT_COMMENT">
+    <column name="USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="REPOSITORY_NAME" type="varchar(100)" nullable="false"/>
+    <column name="COMMIT_ID" type="varchar(100)" nullable="false"/>
+    <column name="COMMENT_ID" type="int" nullable="false" autoIncrement="true" unique="true"/>
+    <column name="COMMENTED_USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="CONTENT" type="text" nullable="false"/>
+    <column name="FILE_NAME" type="varchar(260)" nullable="true"/>
+    <column name="OLD_LINE_NUMBER" type="int" nullable="true"/>
+    <column name="NEW_LINE_NUMBER" type="int" nullable="true"/>
+    <column name="REGISTERED_DATE" type="datetime" nullable="false"/>
+    <column name="UPDATED_DATE" type="datetime" nullable="false"/>
+    <column name="ISSUE_ID" type="int" nullable="true"/>
+  </createTable>
+
+  <addPrimaryKey constraintName="IDX_COMMIT_COMMENT_PK" tableName="COMMIT_COMMENT" columnNames="COMMENT_ID"/>
+  <addForeignKeyConstraint constraintName="IDX_COMMIT_COMMENT_FK0" baseTableName="COMMIT_COMMENT" baseColumnNames="USER_NAME, REPOSITORY_NAME" referencedTableName="REPOSITORY" referencedColumnNames="USER_NAME, REPOSITORY_NAME"/>
+
+  <!--================================================================================================-->
+  <!-- COMMIT_STATUS -->
+  <!--================================================================================================-->
+  <createTable tableName="COMMIT_STATUS">
+    <column name="COMMIT_STATUS_ID" type="int" nullable="false" autoIncrement="true" unique="true"/>
+    <column name="USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="REPOSITORY_NAME" type="varchar(100)" nullable="false"/>
+    <column name="COMMIT_ID" type="varchar(40)" nullable="false"/>
+    <column name="CONTEXT" type="varchar(255)" nullable="false"/>
+    <column name="STATE" type="varchar(10)" nullable="false"/>
+    <column name="TARGET_URL" type="varchar(200)" nullable="true"/>
+    <column name="DESCRIPTION" type="text" nullable="true"/>
+    <column name="CREATOR" type="varchar(100)" nullable="false"/>
+    <column name="REGISTERED_DATE" type="datetime" nullable="false"/>
+    <column name="UPDATED_DATE" type="datetime" nullable="false"/>
+  </createTable>
+
+  <addPrimaryKey constraintName="IDX_COMMIT_STATUS_PK" tableName="COMMIT_STATUS" columnNames="COMMIT_STATUS_ID"/>
+  <addUniqueConstraint constraintName="IDX_COMMIT_STATUS_1" tableName="COMMIT_STATUS" columnNames="USER_NAME, REPOSITORY_NAME, COMMIT_ID, CONTEXT"/>
+  <addForeignKeyConstraint constraintName="IDX_COMMIT_STATUS_FK3" baseTableName="COMMIT_STATUS" baseColumnNames="CREATOR" referencedTableName="ACCOUNT" referencedColumnNames="USER_NAME" onDelete="CASCADE" onUpdate="CASCADE"/>
+  <addForeignKeyConstraint constraintName="IDX_COMMIT_STATUS_FK2" baseTableName="COMMIT_STATUS" baseColumnNames="USER_NAME" referencedTableName="ACCOUNT" referencedColumnNames="USER_NAME" onDelete="CASCADE" onUpdate="CASCADE"/>
+  <addForeignKeyConstraint constraintName="IDX_COMMIT_STATUS_FK1" baseTableName="COMMIT_STATUS" baseColumnNames="USER_NAME, REPOSITORY_NAME" referencedTableName="REPOSITORY" referencedColumnNames="USER_NAME, REPOSITORY_NAME" onDelete="CASCADE" onUpdate="CASCADE"/>
+
+  <!--================================================================================================-->
+  <!-- GROUP_MEMBER -->
+  <!--================================================================================================-->
+  <createTable tableName="GROUP_MEMBER">
+    <column name="GROUP_NAME" type="varchar(100)" nullable="false"/>
+    <column name="USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="MANAGER" type="boolean" nullable="true"/>
+  </createTable>
+
+  <addPrimaryKey constraintName="IDX_GROUP_MEMBER_PK" tableName="GROUP_MEMBER" columnNames="GROUP_NAME, USER_NAME"/>
+  <addForeignKeyConstraint constraintName="IDX_GROUP_MEMBER_FK1" baseTableName="GROUP_MEMBER" baseColumnNames="USER_NAME" referencedTableName="ACCOUNT" referencedColumnNames="USER_NAME"/>
+  <addForeignKeyConstraint constraintName="IDX_GROUP_MEMBER_FK0" baseTableName="GROUP_MEMBER" baseColumnNames="GROUP_NAME" referencedTableName="ACCOUNT" referencedColumnNames="USER_NAME"/>
+
+  <!--================================================================================================-->
+  <!-- LABEL -->
+  <!--================================================================================================-->
+  <createTable tableName="LABEL">
+    <column name="USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="REPOSITORY_NAME" type="varchar(100)" nullable="false"/>
+    <column name="LABEL_ID" type="int" nullable="false" autoIncrement="true" unique="true"/>
+    <column name="LABEL_NAME" type="varchar(100)" nullable="false"/>
+    <column name="COLOR" type="char(6)" nullable="false"/>
+  </createTable>
+
+  <addPrimaryKey constraintName="IDX_LABEL_PK" tableName="LABEL" columnNames="USER_NAME, REPOSITORY_NAME, LABEL_ID"/>
+  <addForeignKeyConstraint constraintName="IDX_LABEL_FK0" baseTableName="LABEL" baseColumnNames="USER_NAME, REPOSITORY_NAME" referencedTableName="REPOSITORY" referencedColumnNames="USER_NAME, REPOSITORY_NAME"/>
+
+  <!--================================================================================================-->
+  <!-- MILESTONE -->
+  <!--================================================================================================-->
+  <createTable tableName="MILESTONE">
+    <column name="USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="REPOSITORY_NAME" type="varchar(100)" nullable="false"/>
+    <column name="MILESTONE_ID" type="int" nullable="false" autoIncrement="true" unique="true"/>
+    <column name="TITLE" type="varchar(100)" nullable="false"/>
+    <column name="DESCRIPTION" type="text" nullable="true"/>
+    <column name="DUE_DATE" type="datetime" nullable="true"/>
+    <column name="CLOSED_DATE" type="datetime" nullable="true"/>
+  </createTable>
+
+  <addPrimaryKey constraintName="IDX_MILESTONE_PK" tableName="MILESTONE" columnNames="USER_NAME, REPOSITORY_NAME, MILESTONE_ID"/>
+  <addForeignKeyConstraint constraintName="IDX_MILESTONE_FK0" baseTableName="MILESTONE" baseColumnNames="USER_NAME, REPOSITORY_NAME" referencedTableName="REPOSITORY" referencedColumnNames="USER_NAME, REPOSITORY_NAME"/>
+
+  <!--================================================================================================-->
+  <!-- ISSUE -->
+  <!--================================================================================================-->
+  <createTable tableName="ISSUE">
+    <column name="USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="REPOSITORY_NAME" type="varchar(100)" nullable="false"/>
+    <column name="ISSUE_ID" type="int" nullable="false"/>
+    <column name="OPENED_USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="MILESTONE_ID" type="int" nullable="true"/>
+    <column name="ASSIGNED_USER_NAME" type="varchar(100)" nullable="true"/>
+    <column name="TITLE" type="text" nullable="false"/>
+    <column name="CONTENT" type="text" nullable="true"/>
+    <column name="CLOSED" type="boolean" nullable="false"/>
+    <column name="REGISTERED_DATE" type="datetime" nullable="false"/>
+    <column name="UPDATED_DATE" type="datetime" nullable="false"/>
+    <column name="PULL_REQUEST" type="boolean" nullable="false"/>
+  </createTable>
+
+  <addPrimaryKey constraintName="IDX_ISSUE_PK" tableName="ISSUE" columnNames="ISSUE_ID, USER_NAME, REPOSITORY_NAME"/>
+  <addForeignKeyConstraint constraintName="IDX_ISSUE_FK0" baseTableName="ISSUE" baseColumnNames="USER_NAME, REPOSITORY_NAME" referencedTableName="REPOSITORY" referencedColumnNames="USER_NAME, REPOSITORY_NAME"/>
+  <addForeignKeyConstraint constraintName="IDX_ISSUE_FK2" baseTableName="ISSUE" baseColumnNames="MILESTONE_ID" referencedTableName="MILESTONE" referencedColumnNames="MILESTONE_ID"/>
+  <addForeignKeyConstraint constraintName="IDX_ISSUE_FK1" baseTableName="ISSUE" baseColumnNames="OPENED_USER_NAME" referencedTableName="ACCOUNT" referencedColumnNames="USER_NAME"/>
+
+  <!--================================================================================================-->
+  <!-- ISSUE_COMMENT -->
+  <!--================================================================================================-->
+  <createTable tableName="ISSUE_COMMENT">
+    <column name="USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="REPOSITORY_NAME" type="varchar(100)" nullable="false"/>
+    <column name="ISSUE_ID" type="int" nullable="false"/>
+    <column name="COMMENT_ID" type="int" nullable="false" autoIncrement="true" unique="true"/>
+    <column name="ACTION" type="varchar(20)" nullable="false"/>
+    <column name="COMMENTED_USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="CONTENT" type="text" nullable="false"/>
+    <column name="REGISTERED_DATE" type="datetime" nullable="false"/>
+    <column name="UPDATED_DATE" type="datetime" nullable="false"/>
+  </createTable>
+
+  <addPrimaryKey constraintName="IDX_ISSUE_COMMENT_PK" tableName="ISSUE_COMMENT" columnNames="COMMENT_ID"/>
+  <addForeignKeyConstraint constraintName="IDX_ISSUE_COMMENT_FK0" baseTableName="ISSUE_COMMENT" baseColumnNames="USER_NAME, REPOSITORY_NAME, ISSUE_ID" referencedTableName="ISSUE" referencedColumnNames="USER_NAME, REPOSITORY_NAME, ISSUE_ID"/>
+
+  <!--================================================================================================-->
+  <!-- ISSUE_ID -->
+  <!--================================================================================================-->
+  <createTable tableName="ISSUE_ID">
+    <column name="USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="REPOSITORY_NAME" type="varchar(100)" nullable="false"/>
+    <column name="ISSUE_ID" type="int" nullable="false"/>
+  </createTable>
+
+  <addPrimaryKey constraintName="IDX_ISSUE_ID_PK" tableName="ISSUE_ID" columnNames="USER_NAME, REPOSITORY_NAME"/>
+  <addForeignKeyConstraint constraintName="IDX_ISSUE_ID_FK1" baseTableName="ISSUE_ID" baseColumnNames="USER_NAME, REPOSITORY_NAME" referencedTableName="REPOSITORY" referencedColumnNames="USER_NAME, REPOSITORY_NAME"/>
+
+  <!--================================================================================================-->
+  <!-- ISSUE_ID -->
+  <!--================================================================================================-->
+  <createTable tableName="ISSUE_LABEL">
+    <column name="USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="REPOSITORY_NAME" type="varchar(100)" nullable="false"/>
+    <column name="ISSUE_ID" type="int" nullable="false"/>
+    <column name="LABEL_ID" type="int" nullable="false"/>
+  </createTable>
+
+  <addPrimaryKey constraintName="IDX_ISSUE_LABEL_PK" tableName="ISSUE_LABEL" columnNames="USER_NAME, REPOSITORY_NAME, ISSUE_ID, LABEL_ID"/>
+  <addForeignKeyConstraint constraintName="IDX_ISSUE_LABEL_FK0" baseTableName="ISSUE_LABEL" baseColumnNames="USER_NAME, REPOSITORY_NAME, ISSUE_ID" referencedTableName="ISSUE" referencedColumnNames="USER_NAME, REPOSITORY_NAME, ISSUE_ID"/>
+
+  <!--================================================================================================-->
+  <!-- PLUGIN -->
+  <!--================================================================================================-->
+  <createTable tableName="PLUGIN">
+    <column name="PLUGIN_ID" type="varchar(100)" nullable="false"/>
+    <column name="VERSION" type="varchar(100)" nullable="false"/>
+  </createTable>
+
+  <addPrimaryKey constraintName="IDX_PLUGIN_PK" tableName="PLUGIN" columnNames="PLUGIN_ID"/>
+
+  <!--================================================================================================-->
+  <!-- PULL_REQUEST -->
+  <!--================================================================================================-->
+  <createTable tableName="PULL_REQUEST">
+    <column name="USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="REPOSITORY_NAME" type="varchar(100)" nullable="false"/>
+    <column name="ISSUE_ID" type="int" nullable="false"/>
+    <column name="BRANCH" type="varchar(100)" nullable="false"/>
+    <column name="REQUEST_USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="REQUEST_REPOSITORY_NAME" type="varchar(100)" nullable="false"/>
+    <column name="REQUEST_BRANCH" type="varchar(100)" nullable="false"/>
+    <column name="COMMIT_ID_FROM" type="varchar(40)" nullable="false"/>
+    <column name="COMMIT_ID_TO" type="varchar(40)" nullable="false"/>
+  </createTable>
+
+  <addPrimaryKey constraintName="IDX_PULL_REQUEST_PK" tableName="PULL_REQUEST" columnNames="USER_NAME, REPOSITORY_NAME, ISSUE_ID"/>
+  <addForeignKeyConstraint constraintName="IDX_PULL_REQUEST_FK0" baseTableName="PULL_REQUEST" baseColumnNames="USER_NAME, REPOSITORY_NAME, ISSUE_ID" referencedTableName="ISSUE" referencedColumnNames="USER_NAME, REPOSITORY_NAME, ISSUE_ID"/>
+
+  <!--================================================================================================-->
+  <!-- SSH_KEY -->
+  <!--================================================================================================-->
+  <createTable tableName="SSH_KEY">
+    <column name="USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="SSH_KEY_ID" type="int" nullable="false" autoIncrement="true" unique="true"/>
+    <column name="TITLE" type="varchar(100)" nullable="false"/>
+    <column name="PUBLIC_KEY" type="text" nullable="false"/>
+  </createTable>
+
+  <addPrimaryKey constraintName="IDX_SSH_KEY_PK" tableName="SSH_KEY" columnNames="USER_NAME, SSH_KEY_ID"/>
+  <addForeignKeyConstraint constraintName="IDX_SSH_KEY_FK0" baseTableName="SSH_KEY" baseColumnNames="USER_NAME" referencedTableName="ACCOUNT" referencedColumnNames="USER_NAME"/>
+
+  <!--================================================================================================-->
+  <!-- WEB_HOOK -->
+  <!--================================================================================================-->
+  <createTable tableName="WEB_HOOK">
+    <column name="USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="REPOSITORY_NAME" type="varchar(100)" nullable="false"/>
+    <column name="URL" type="varchar(200)" nullable="false"/>
+    <column name="TOKEN" type="varchar(100)" nullable="true"/>
+    <column name="CTYPE" type="varchar(10)" nullable="true"/>
+  </createTable>
+
+  <addPrimaryKey constraintName="IDX_WEB_HOOK_PK" tableName="WEB_HOOK" columnNames="USER_NAME, REPOSITORY_NAME, URL"/>
+  <addForeignKeyConstraint constraintName="IDX_WEB_HOOK_FK0" baseTableName="WEB_HOOK" baseColumnNames="USER_NAME, REPOSITORY_NAME" referencedTableName="REPOSITORY" referencedColumnNames="USER_NAME, REPOSITORY_NAME"/>
+
+  <!--================================================================================================-->
+  <!-- WEB_HOOK_EVENT -->
+  <!--================================================================================================-->
+  <createTable tableName="WEB_HOOK_EVENT">
+    <column name="USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="REPOSITORY_NAME" type="varchar(100)" nullable="false"/>
+    <column name="URL" type="varchar(200)" nullable="false"/>
+    <column name="EVENT" type="varchar(30)" nullable="false"/>
+  </createTable>
+
+  <addPrimaryKey constraintName="IDX_WEB_HOOK_EVENT_PK" tableName="WEB_HOOK_EVENT" columnNames="USER_NAME, REPOSITORY_NAME, URL, EVENT"/>
+  <addForeignKeyConstraint constraintName="IDX_WEB_HOOK_EVENT_FK0" baseTableName="WEB_HOOK_EVENT" baseColumnNames="USER_NAME, REPOSITORY_NAME, URL" referencedTableName="WEB_HOOK" referencedColumnNames="USER_NAME, REPOSITORY_NAME, URL" onDelete="CASCADE" onUpdate="CASCADE"/>
+
+  <!--================================================================================================-->
+  <!-- PROTECTED_BRANCH -->
+  <!--================================================================================================-->
+  <createTable tableName="PROTECTED_BRANCH">
+    <column name="USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="REPOSITORY_NAME" type="varchar(100)" nullable="false"/>
+    <column name="BRANCH" type="varchar(100)" nullable="false"/>
+    <column name="STATUS_CHECK_ADMIN" type="boolean" nullable="false" defaultValueBoolean="false"/>
+  </createTable>
+
+  <addPrimaryKey constraintName="IDX_PROTECTED_BRANCH_PK" tableName="PROTECTED_BRANCH" columnNames="USER_NAME, REPOSITORY_NAME, BRANCH"/>
+  <addForeignKeyConstraint constraintName="IDX_PROTECTED_BRANCH_FK0" baseTableName="PROTECTED_BRANCH" baseColumnNames="USER_NAME, REPOSITORY_NAME" referencedTableName="REPOSITORY" referencedColumnNames="USER_NAME, REPOSITORY_NAME" onDelete="CASCADE" onUpdate="CASCADE"/>
+
+  <!--================================================================================================-->
+  <!-- PROTECTED_BRANCH_REQUIRE_CONTEXT -->
+  <!--================================================================================================-->
+  <createTable tableName="PROTECTED_BRANCH_REQUIRE_CONTEXT">
+    <column name="USER_NAME" type="varchar(100)" nullable="false"/>
+    <column name="REPOSITORY_NAME" type="varchar(100)" nullable="false"/>
+    <column name="BRANCH" type="varchar(100)" nullable="false"/>
+    <column name="CONTEXT" type="varchar(255)" nullable="false"/>
+  </createTable>
+
+  <addPrimaryKey constraintName="IDX_PROTECTED_BRANCH_REQUIRE_CONTEXT_PK" tableName="PROTECTED_BRANCH_REQUIRE_CONTEXT" columnNames="USER_NAME, REPOSITORY_NAME, BRANCH, CONTEXT"/>
+  <addForeignKeyConstraint constraintName="IDX_PROTECTED_BRANCH_REQUIRE_CONTEXT_FK0" baseTableName="PROTECTED_BRANCH_REQUIRE_CONTEXT" baseColumnNames="USER_NAME, REPOSITORY_NAME, BRANCH" referencedTableName="PROTECTED_BRANCH" referencedColumnNames="USER_NAME, REPOSITORY_NAME, BRANCH" onDelete="CASCADE" onUpdate="CASCADE"/>
+
+</changeSet>

src/main/scala/ScalatraBootstrap.scala

@@ -27,12 +27,10 @@ class ScalatraBootstrap extends LifeCycle {
     }
 
     context.mount(new IndexController, "/")
-    context.mount(new SearchController, "/")
+    context.mount(new ApiController, "/api/v3")
     context.mount(new FileUploadController, "/upload")
+    context.mount(new SystemSettingsController, "/admin")
     context.mount(new DashboardController, "/*")
-    context.mount(new UserManagementController, "/*")
-    context.mount(new SystemSettingsController, "/*")
-    context.mount(new PluginsController, "/*")
     context.mount(new AccountController, "/*")
     context.mount(new RepositoryViewerController, "/*")
     context.mount(new WikiController, "/*")

src/main/scala/gitbucket/core/GitBucketCoreModule.scala

@@ -0,0 +1,11 @@
+package gitbucket.core
+
+import io.github.gitbucket.solidbase.migration.{SqlMigration, LiquibaseMigration}
+import io.github.gitbucket.solidbase.model.{Version, Module}
+
+object GitBucketCoreModule extends Module("gitbucket-core",
+  new Version("4.0.0",
+    new LiquibaseMigration("update/gitbucket-core_4.0.xml"),
+    new SqlMigration("update/gitbucket-core_4.0.sql")
+  )
+)

src/main/scala/gitbucket/core/api/ApiIssue.scala

@@ -20,6 +20,16 @@ case class ApiIssue(
   body: String)(repositoryName: RepositoryName, isPullRequest: Boolean){
   val comments_url = ApiPath(s"/api/v3/repos/${repositoryName.fullName}/issues/${number}/comments")
   val html_url = ApiPath(s"/${repositoryName.fullName}/${if(isPullRequest){ "pull" }else{ "issues" }}/${number}")
+  val pull_request = if (isPullRequest) {
+    Some(Map(
+      "url" -> ApiPath(s"/api/v3/repos/${repositoryName.fullName}/pulls/${number}"),
+      "html_url" -> ApiPath(s"/${repositoryName.fullName}/pull/${number}")
+      // "diff_url" -> ApiPath(s"/${repositoryName.fullName}/pull/${number}.diff"),
+      // "patch_url" -> ApiPath(s"/${repositoryName.fullName}/pull/${number}.patch")
+    ))
+  } else {
+    None
+  }
 }
 
 object ApiIssue{

src/main/scala/gitbucket/core/controller/AccountController.scala

@@ -1,7 +1,6 @@
 package gitbucket.core.controller
 
 import gitbucket.core.account.html
-import gitbucket.core.api._
 import gitbucket.core.helper
 import gitbucket.core.model.GroupMember
 import gitbucket.core.service._
@@ -14,22 +13,19 @@ import gitbucket.core.util._
 
 import io.github.gitbucket.scalatra.forms._
 import org.apache.commons.io.FileUtils
-import org.eclipse.jgit.api.Git
-import org.eclipse.jgit.dircache.DirCache
-import org.eclipse.jgit.lib.{FileMode, Constants}
 import org.scalatra.i18n.Messages
 
 
 class AccountController extends AccountControllerBase
   with AccountService with RepositoryService with ActivityService with WikiService with LabelsService with SshKeyService
   with OneselfAuthenticator with UsersAuthenticator with GroupManagerAuthenticator with ReadableUsersAuthenticator
-  with AccessTokenService with WebHookService
+  with AccessTokenService with WebHookService with RepositoryCreationService
 
 
 trait AccountControllerBase extends AccountManagementControllerBase {
   self: AccountService with RepositoryService with ActivityService with WikiService with LabelsService with SshKeyService
     with OneselfAuthenticator with UsersAuthenticator with GroupManagerAuthenticator with ReadableUsersAuthenticator
-    with AccessTokenService with WebHookService =>
+    with AccessTokenService with WebHookService with RepositoryCreationService =>
 
   case class AccountNewForm(userName: String, password: String, fullName: String, mailAddress: String,
                             url: Option[String], fileId: Option[String])
@@ -133,7 +129,7 @@ trait AccountControllerBase extends AccountManagementControllerBase {
           val members = getGroupMembers(account.userName)
           gitbucket.core.account.html.repositories(account,
             if(account.isGroupAccount) Nil else getGroupsByUserName(userName),
-            getVisibleRepositories(context.loginAccount, context.baseUrl, Some(userName)),
+            getVisibleRepositories(context.loginAccount, Some(userName)),
             context.loginAccount.exists(x => members.exists { member => member.userName == x.userName && member.isManager }))
         }
       }
@@ -156,25 +152,6 @@ trait AccountControllerBase extends AccountManagementControllerBase {
     }
   }
 
-  /**
-   * https://developer.github.com/v3/users/#get-a-single-user
-   */
-  get("/api/v3/users/:userName") {
-    getAccountByUserName(params("userName")).map { account =>
-      JsonFormat(ApiUser(account))
-    } getOrElse NotFound
-  }
-
-  /**
-   * https://developer.github.com/v3/users/#get-the-authenticated-user
-   */
-  get("/api/v3/user") {
-    context.loginAccount.map { account =>
-      JsonFormat(ApiUser(account))
-    } getOrElse Unauthorized
-  }
-
-
   get("/:userName/_edit")(oneselfOnly {
     val userName = params("userName")
     getAccountByUserName(userName).map { x =>
@@ -366,8 +343,8 @@ trait AccountControllerBase extends AccountManagementControllerBase {
    */
   post("/new", newRepositoryForm)(usersOnly { form =>
     LockUtil.lock(s"${form.owner}/${form.name}"){
-      if(getRepository(form.owner, form.name, context.baseUrl).isEmpty){
-        createRepository(form.owner, form.name, form.description, form.isPrivate, form.createReadme)
+      if(getRepository(form.owner, form.name).isEmpty){
+        createRepository(context.loginAccount.get, form.owner, form.name, form.description, form.isPrivate, form.createReadme)
       }
 
       // redirect to the repository
@@ -375,54 +352,6 @@ trait AccountControllerBase extends AccountManagementControllerBase {
     }
   })
 
-  /**
-   * Create user repository
-   * https://developer.github.com/v3/repos/#create
-   */
-  post("/api/v3/user/repos")(usersOnly {
-    val owner = context.loginAccount.get.userName
-    (for {
-      data <- extractFromJsonBody[CreateARepository] if data.isValid
-    } yield {
-      LockUtil.lock(s"${owner}/${data.name}") {
-        if(getRepository(owner, data.name, context.baseUrl).isEmpty){
-          createRepository(owner, data.name, data.description, data.`private`, data.auto_init)
-          val repository = getRepository(owner, data.name, context.baseUrl).get
-          JsonFormat(ApiRepository(repository, ApiUser(getAccountByUserName(owner).get)))
-        } else {
-          ApiError(
-            "A repository with this name already exists on this account", 
-            Some("https://developer.github.com/v3/repos/#create")
-          )
-        }
-      }
-    }) getOrElse NotFound
-  })
-
-  /**
-   * Create group repository
-   * https://developer.github.com/v3/repos/#create
-   */
-  post("/api/v3/orgs/:org/repos")(managersOnly {
-    val groupName = params("org")
-    (for {
-      data <- extractFromJsonBody[CreateARepository] if data.isValid
-    } yield {
-      LockUtil.lock(s"${groupName}/${data.name}") {
-        if(getRepository(groupName, data.name, context.baseUrl).isEmpty){
-          createRepository(groupName, data.name, data.description, data.`private`, data.auto_init)
-          val repository = getRepository(groupName, data.name, context.baseUrl).get
-          JsonFormat(ApiRepository(repository, ApiUser(getAccountByUserName(groupName).get)))
-        } else {
-          ApiError(
-            "A repository with this name already exists for this group", 
-            Some("https://developer.github.com/v3/repos/#create")
-          )
-        }
-      }
-    }) getOrElse NotFound
-  })
-
   get("/:owner/:repository/fork")(readableUsersOnly { repository =>
     val loginAccount   = context.loginAccount.get
     val loginUserName  = loginAccount.userName
@@ -447,7 +376,7 @@ trait AccountControllerBase extends AccountManagementControllerBase {
     val accountName   = form.accountName
 
     LockUtil.lock(s"${accountName}/${repository.name}"){
-      if(getRepository(accountName, repository.name, baseUrl).isDefined ||
+      if(getRepository(accountName, repository.name).isDefined ||
           (accountName != loginUserName && !getGroupsByUserName(loginUserName).contains(accountName))){
         // redirect to the repository if repository already exists
         redirect(s"/${accountName}/${repository.name}")
@@ -456,7 +385,7 @@ trait AccountControllerBase extends AccountManagementControllerBase {
         val originUserName = repository.repository.originUserName.getOrElse(repository.owner)
         val originRepositoryName = repository.repository.originRepositoryName.getOrElse(repository.name)
 
-        createRepository(
+        insertRepository(
           repositoryName       = repository.name,
           userName             = accountName,
           description          = repository.repository.description,
@@ -496,68 +425,6 @@ trait AccountControllerBase extends AccountManagementControllerBase {
     }
   })
 
-  private def createRepository(owner: String, name: String, description: Option[String], isPrivate: Boolean, createReadme: Boolean) {
-    val ownerAccount  = getAccountByUserName(owner).get
-    val loginAccount  = context.loginAccount.get
-    val loginUserName = loginAccount.userName
-
-    // Insert to the database at first
-    createRepository(name, owner, description, isPrivate)
-
-    // Add collaborators for group repository
-    if(ownerAccount.isGroupAccount){
-      getGroupMembers(owner).foreach { member =>
-        addCollaborator(owner, name, member.userName)
-      }
-    }
-
-    // Insert default labels
-    insertDefaultLabels(owner, name)
-
-    // Create the actual repository
-    val gitdir = getRepositoryDir(owner, name)
-    JGitUtil.initRepository(gitdir)
-
-    if(createReadme){
-      using(Git.open(gitdir)){ git =>
-        val builder  = DirCache.newInCore.builder()
-        val inserter = git.getRepository.newObjectInserter()
-        val headId   = git.getRepository.resolve(Constants.HEAD + "^{commit}")
-        val content  = if(description.nonEmpty){
-          name + "\n" +
-          "===============\n" +
-          "\n" +
-          description.get
-        } else {
-          name + "\n" +
-          "===============\n"
-        }
-
-        builder.add(JGitUtil.createDirCacheEntry("README.md", FileMode.REGULAR_FILE,
-          inserter.insert(Constants.OBJ_BLOB, content.getBytes("UTF-8"))))
-        builder.finish()
-
-        JGitUtil.createNewCommit(git, inserter, headId, builder.getDirCache.writeTree(inserter),
-          Constants.HEAD, loginAccount.fullName, loginAccount.mailAddress, "Initial commit")
-      }
-    }
-
-    // Create Wiki repository
-    createWikiRepository(loginAccount, owner, name)
-
-    // Record activity
-    recordCreateRepositoryActivity(owner, name, loginUserName)
-  }
-
-  private def insertDefaultLabels(userName: String, repositoryName: String): Unit = {
-    createLabel(userName, repositoryName, "bug", "fc2929")
-    createLabel(userName, repositoryName, "duplicate", "cccccc")
-    createLabel(userName, repositoryName, "enhancement", "84b6eb")
-    createLabel(userName, repositoryName, "invalid", "e6e6e6")
-    createLabel(userName, repositoryName, "question", "cc317c")
-    createLabel(userName, repositoryName, "wontfix", "ffffff")
-  }
-
   private def existsAccount: Constraint = new Constraint(){
     override def validate(name: String, value: String, messages: Messages): Option[String] =
       if(getAccountByUserName(value).isEmpty) Some("User or group does not exist.") else None

src/main/scala/gitbucket/core/controller/ApiController.scala

@@ -0,0 +1,389 @@
+package gitbucket.core.controller
+
+import gitbucket.core.api._
+import gitbucket.core.model._
+import gitbucket.core.service.IssuesService.IssueSearchCondition
+import gitbucket.core.service.PullRequestService._
+import gitbucket.core.service._
+import gitbucket.core.util.ControlUtil._
+import gitbucket.core.util.Directory._
+import gitbucket.core.util.JGitUtil.CommitInfo
+import gitbucket.core.util._
+import gitbucket.core.util.Implicits._
+import org.eclipse.jgit.api.Git
+import org.scalatra.{NoContent, UnprocessableEntity, Created}
+import scala.collection.JavaConverters._
+
+class ApiController extends ApiControllerBase
+  with RepositoryService
+  with AccountService
+  with ProtectedBranchService
+  with IssuesService
+  with LabelsService
+  with PullRequestService
+  with CommitStatusService
+  with RepositoryCreationService
+  with HandleCommentService
+  with WebHookService
+  with WebHookPullRequestService
+  with WebHookIssueCommentService
+  with WikiService
+  with ActivityService
+  with OwnerAuthenticator
+  with UsersAuthenticator
+  with GroupManagerAuthenticator
+  with ReferrerAuthenticator
+  with ReadableUsersAuthenticator
+  with CollaboratorsAuthenticator
+
+trait ApiControllerBase extends ControllerBase {
+  self: RepositoryService
+    with AccountService
+    with ProtectedBranchService
+    with IssuesService
+    with LabelsService
+    with PullRequestService
+    with CommitStatusService
+    with RepositoryCreationService
+    with HandleCommentService
+    with OwnerAuthenticator
+    with UsersAuthenticator
+    with GroupManagerAuthenticator
+    with ReferrerAuthenticator
+    with ReadableUsersAuthenticator
+    with CollaboratorsAuthenticator =>
+
+  /**
+   * https://developer.github.com/v3/users/#get-a-single-user
+   */
+  get("/api/v3/users/:userName") {
+    getAccountByUserName(params("userName")).map { account =>
+      JsonFormat(ApiUser(account))
+    } getOrElse NotFound
+  }
+
+  /**
+   * https://developer.github.com/v3/users/#get-the-authenticated-user
+   */
+  get("/api/v3/user") {
+    context.loginAccount.map { account =>
+      JsonFormat(ApiUser(account))
+    } getOrElse Unauthorized
+  }
+
+  /**
+   * Create user repository
+   * https://developer.github.com/v3/repos/#create
+   */
+  post("/api/v3/user/repos")(usersOnly {
+    val owner = context.loginAccount.get.userName
+    (for {
+      data <- extractFromJsonBody[CreateARepository] if data.isValid
+    } yield {
+      LockUtil.lock(s"${owner}/${data.name}") {
+        if(getRepository(owner, data.name).isEmpty){
+          createRepository(context.loginAccount.get, owner, data.name, data.description, data.`private`, data.auto_init)
+          val repository = getRepository(owner, data.name).get
+          JsonFormat(ApiRepository(repository, ApiUser(getAccountByUserName(owner).get)))
+        } else {
+          ApiError(
+            "A repository with this name already exists on this account",
+            Some("https://developer.github.com/v3/repos/#create")
+          )
+        }
+      }
+    }) getOrElse NotFound
+  })
+
+  /**
+   * Create group repository
+   * https://developer.github.com/v3/repos/#create
+   */
+  post("/api/v3/orgs/:org/repos")(managersOnly {
+    val groupName = params("org")
+    (for {
+      data <- extractFromJsonBody[CreateARepository] if data.isValid
+    } yield {
+      LockUtil.lock(s"${groupName}/${data.name}") {
+        if(getRepository(groupName, data.name).isEmpty){
+          createRepository(context.loginAccount.get, groupName, data.name, data.description, data.`private`, data.auto_init)
+          val repository = getRepository(groupName, data.name).get
+          JsonFormat(ApiRepository(repository, ApiUser(getAccountByUserName(groupName).get)))
+        } else {
+          ApiError(
+            "A repository with this name already exists for this group",
+            Some("https://developer.github.com/v3/repos/#create")
+          )
+        }
+      }
+    }) getOrElse NotFound
+  })
+
+  /** https://developer.github.com/v3/repos/#enabling-and-disabling-branch-protection */
+  patch("/api/v3/repos/:owner/:repo/branches/:branch")(ownerOnly { repository =>
+    import gitbucket.core.api._
+    (for{
+      branch <- params.get("branch") if repository.branchList.find(_ == branch).isDefined
+      protection <- extractFromJsonBody[ApiBranchProtection.EnablingAndDisabling].map(_.protection)
+    } yield {
+      if(protection.enabled){
+        enableBranchProtection(repository.owner, repository.name, branch, protection.status.enforcement_level == ApiBranchProtection.Everyone, protection.status.contexts)
+      } else {
+        disableBranchProtection(repository.owner, repository.name, branch)
+      }
+      JsonFormat(ApiBranch(branch, protection)(RepositoryName(repository)))
+    }) getOrElse NotFound
+  })
+
+  /**
+   * @see https://developer.github.com/v3/rate_limit/#get-your-current-rate-limit-status
+   * but not enabled.
+   */
+  get("/api/v3/rate_limit"){
+    contentType = formats("json")
+    // this message is same as github enterprise...
+    org.scalatra.NotFound(ApiError("Rate limiting is not enabled."))
+  }
+
+  /**
+   * https://developer.github.com/v3/issues/comments/#list-comments-on-an-issue
+   */
+  get("/api/v3/repos/:owner/:repository/issues/:id/comments")(referrersOnly { repository =>
+    (for{
+      issueId <- params("id").toIntOpt
+      comments = getCommentsForApi(repository.owner, repository.name, issueId.toInt)
+    } yield {
+      JsonFormat(comments.map{ case (issueComment, user, issue) => ApiComment(issueComment, RepositoryName(repository), issueId, ApiUser(user), issue.isPullRequest) })
+    }).getOrElse(NotFound)
+  })
+
+  /**
+   * https://developer.github.com/v3/issues/comments/#create-a-comment
+   */
+  post("/api/v3/repos/:owner/:repository/issues/:id/comments")(readableUsersOnly { repository =>
+    (for{
+      issueId      <- params("id").toIntOpt
+      issue        <- getIssue(repository.owner, repository.name, issueId.toString)
+      body         <- extractFromJsonBody[CreateAComment].map(_.body) if ! body.isEmpty
+      action       =  params.get("action").filter(_ => isEditable(issue.userName, issue.repositoryName, issue.openedUserName))
+      (issue, id)  <- handleComment(issue, Some(body), repository, action)
+      issueComment <- getComment(repository.owner, repository.name, id.toString())
+    } yield {
+      JsonFormat(ApiComment(issueComment, RepositoryName(repository), issueId, ApiUser(context.loginAccount.get), issue.isPullRequest))
+    }) getOrElse NotFound
+  })
+
+  /**
+   * List all labels for this repository
+   * https://developer.github.com/v3/issues/labels/#list-all-labels-for-this-repository
+   */
+  get("/api/v3/repos/:owner/:repository/labels")(referrersOnly { repository =>
+    JsonFormat(getLabels(repository.owner, repository.name).map { label =>
+      ApiLabel(label, RepositoryName(repository))
+    })
+  })
+
+  /**
+   * Get a single label
+   * https://developer.github.com/v3/issues/labels/#get-a-single-label
+   */
+  get("/api/v3/repos/:owner/:repository/labels/:labelName")(referrersOnly { repository =>
+    getLabel(repository.owner, repository.name, params("labelName")).map { label =>
+      JsonFormat(ApiLabel(label, RepositoryName(repository)))
+    } getOrElse NotFound()
+  })
+
+  /**
+   * Create a label
+   * https://developer.github.com/v3/issues/labels/#create-a-label
+   */
+  post("/api/v3/repos/:owner/:repository/labels")(collaboratorsOnly { repository =>
+    (for{
+      data <- extractFromJsonBody[CreateALabel] if data.isValid
+    } yield {
+      LockUtil.lock(RepositoryName(repository).fullName) {
+        if (getLabel(repository.owner, repository.name, data.name).isEmpty) {
+          val labelId = createLabel(repository.owner, repository.name, data.name, data.color)
+          getLabel(repository.owner, repository.name, labelId).map { label =>
+            Created(JsonFormat(ApiLabel(label, RepositoryName(repository))))
+          } getOrElse NotFound()
+        } else {
+          // TODO ApiError should support errors field to enhance compatibility of GitHub API
+          UnprocessableEntity(ApiError(
+            "Validation Failed",
+            Some("https://developer.github.com/v3/issues/labels/#create-a-label")
+          ))
+        }
+      }
+    }) getOrElse NotFound()
+  })
+
+  /**
+   * Update a label
+   * https://developer.github.com/v3/issues/labels/#update-a-label
+   */
+  patch("/api/v3/repos/:owner/:repository/labels/:labelName")(collaboratorsOnly { repository =>
+    (for{
+      data <- extractFromJsonBody[CreateALabel] if data.isValid
+    } yield {
+      LockUtil.lock(RepositoryName(repository).fullName) {
+        getLabel(repository.owner, repository.name, params("labelName")).map { label =>
+          if (getLabel(repository.owner, repository.name, data.name).isEmpty) {
+            updateLabel(repository.owner, repository.name, label.labelId, data.name, data.color)
+            JsonFormat(ApiLabel(
+              getLabel(repository.owner, repository.name, label.labelId).get,
+              RepositoryName(repository)))
+          } else {
+            // TODO ApiError should support errors field to enhance compatibility of GitHub API
+            UnprocessableEntity(ApiError(
+              "Validation Failed",
+              Some("https://developer.github.com/v3/issues/labels/#create-a-label")))
+          }
+        } getOrElse NotFound()
+      }
+    }) getOrElse NotFound()
+  })
+
+  /**
+   * Delete a label
+   * https://developer.github.com/v3/issues/labels/#delete-a-label
+   */
+  delete("/api/v3/repos/:owner/:repository/labels/:labelName")(collaboratorsOnly { repository =>
+    LockUtil.lock(RepositoryName(repository).fullName) {
+      getLabel(repository.owner, repository.name, params("labelName")).map { label =>
+        deleteLabel(repository.owner, repository.name, label.labelId)
+        NoContent()
+      } getOrElse NotFound()
+    }
+  })
+
+  /**
+   * https://developer.github.com/v3/pulls/#list-pull-requests
+   */
+  get("/api/v3/repos/:owner/:repository/pulls")(referrersOnly { repository =>
+    val page       = IssueSearchCondition.page(request)
+    // TODO: more api spec condition
+    val condition = IssueSearchCondition(request)
+    val baseOwner = getAccountByUserName(repository.owner).get
+    val issues:List[(Issue, Account, Int, PullRequest, Repository, Account)] = searchPullRequestByApi(condition, (page - 1) * PullRequestLimit, PullRequestLimit, repository.owner -> repository.name)
+    JsonFormat(issues.map{case (issue, issueUser, commentCount, pullRequest, headRepo, headOwner) =>
+      ApiPullRequest(
+        issue,
+        pullRequest,
+        ApiRepository(headRepo, ApiUser(headOwner)),
+        ApiRepository(repository, ApiUser(baseOwner)),
+        ApiUser(issueUser)) })
+  })
+
+  /**
+   * https://developer.github.com/v3/pulls/#get-a-single-pull-request
+   */
+  get("/api/v3/repos/:owner/:repository/pulls/:id")(referrersOnly { repository =>
+    (for{
+      issueId <- params("id").toIntOpt
+      (issue, pullRequest) <- getPullRequest(repository.owner, repository.name, issueId)
+      users = getAccountsByUserNames(Set(repository.owner, pullRequest.requestUserName, issue.openedUserName), Set())
+      baseOwner <- users.get(repository.owner)
+      headOwner <- users.get(pullRequest.requestUserName)
+      issueUser <- users.get(issue.openedUserName)
+      headRepo  <- getRepository(pullRequest.requestUserName, pullRequest.requestRepositoryName)
+    } yield {
+      JsonFormat(ApiPullRequest(
+        issue,
+        pullRequest,
+        ApiRepository(headRepo, ApiUser(headOwner)),
+        ApiRepository(repository, ApiUser(baseOwner)),
+        ApiUser(issueUser)))
+    }).getOrElse(NotFound)
+  })
+
+  /**
+   * https://developer.github.com/v3/pulls/#list-commits-on-a-pull-request
+   */
+  get("/api/v3/repos/:owner/:repository/pulls/:id/commits")(referrersOnly { repository =>
+    val owner = repository.owner
+    val name = repository.name
+    params("id").toIntOpt.flatMap{ issueId =>
+      getPullRequest(owner, name, issueId) map { case(issue, pullreq) =>
+        using(Git.open(getRepositoryDir(owner, name))){ git =>
+          val oldId = git.getRepository.resolve(pullreq.commitIdFrom)
+          val newId = git.getRepository.resolve(pullreq.commitIdTo)
+          val repoFullName = RepositoryName(repository)
+          val commits = git.log.addRange(oldId, newId).call.iterator.asScala.map(c => ApiCommitListItem(new CommitInfo(c), repoFullName)).toList
+          JsonFormat(commits)
+        }
+      }
+    } getOrElse NotFound
+  })
+
+  /**
+   * https://developer.github.com/v3/repos/#get
+   */
+  get("/api/v3/repos/:owner/:repository")(referrersOnly { repository =>
+    JsonFormat(ApiRepository(repository, ApiUser(getAccountByUserName(repository.owner).get)))
+  })
+
+  /**
+   * https://developer.github.com/v3/repos/statuses/#create-a-status
+   */
+  post("/api/v3/repos/:owner/:repo/statuses/:sha")(collaboratorsOnly { repository =>
+    (for{
+      ref <- params.get("sha")
+      sha <- JGitUtil.getShaByRef(repository.owner, repository.name, ref)
+      data <- extractFromJsonBody[CreateAStatus] if data.isValid
+      creator <- context.loginAccount
+      state <- CommitState.valueOf(data.state)
+      statusId = createCommitStatus(repository.owner, repository.name, sha, data.context.getOrElse("default"),
+        state, data.target_url, data.description, new java.util.Date(), creator)
+      status <- getCommitStatus(repository.owner, repository.name, statusId)
+    } yield {
+      JsonFormat(ApiCommitStatus(status, ApiUser(creator)))
+    }) getOrElse NotFound
+  })
+
+  /**
+   * https://developer.github.com/v3/repos/statuses/#list-statuses-for-a-specific-ref
+   *
+   * ref is Ref to list the statuses from. It can be a SHA, a branch name, or a tag name.
+   */
+  val listStatusesRoute = get("/api/v3/repos/:owner/:repo/commits/:ref/statuses")(referrersOnly { repository =>
+    (for{
+      ref <- params.get("ref")
+      sha <- JGitUtil.getShaByRef(repository.owner, repository.name, ref)
+    } yield {
+      JsonFormat(getCommitStatuesWithCreator(repository.owner, repository.name, sha).map{ case(status, creator) =>
+        ApiCommitStatus(status, ApiUser(creator))
+      })
+    }) getOrElse NotFound
+  })
+
+  /**
+   * https://developer.github.com/v3/repos/statuses/#list-statuses-for-a-specific-ref
+   *
+   * legacy route
+   */
+  get("/api/v3/repos/:owner/:repo/statuses/:ref"){
+    listStatusesRoute.action()
+  }
+
+  /**
+   * https://developer.github.com/v3/repos/statuses/#get-the-combined-status-for-a-specific-ref
+   *
+   * ref is Ref to list the statuses from. It can be a SHA, a branch name, or a tag name.
+   */
+  get("/api/v3/repos/:owner/:repo/commits/:ref/status")(referrersOnly { repository =>
+    (for{
+      ref <- params.get("ref")
+      owner <- getAccountByUserName(repository.owner)
+      sha <- JGitUtil.getShaByRef(repository.owner, repository.name, ref)
+    } yield {
+      val statuses = getCommitStatuesWithCreator(repository.owner, repository.name, sha)
+      JsonFormat(ApiCombinedCommitStatus(sha, statuses, ApiRepository(repository, owner)))
+    }) getOrElse NotFound
+  })
+
+  private def isEditable(owner: String, repository: String, author: String)(implicit context: Context): Boolean =
+    hasWritePermission(owner, repository, context.loginAccount) || author == context.loginAccount.get.userName
+
+}
+

src/main/scala/gitbucket/core/controller/ControllerBase.scala

@@ -180,7 +180,6 @@ abstract class ControllerBase extends ScalatraFilter
  * Context object for the current request.
  */
 case class Context(settings: SystemSettingsService.SystemSettings, loginAccount: Option[Account], request: HttpServletRequest){
-
   val path = settings.baseUrl.getOrElse(request.getContextPath)
   val currentPath = request.getRequestURI.substring(request.getContextPath.length)
   val baseUrl = settings.baseUrl(request)

src/main/scala/gitbucket/core/controller/DashboardController.scala

@@ -94,7 +94,7 @@ trait DashboardControllerBase extends ControllerBase {
 
     val userName  = context.loginAccount.get.userName
     val condition = getOrCreateCondition(Keys.Session.DashboardIssues, filter, userName)
-    val userRepos = getUserRepositories(userName, context.baseUrl, true).map(repo => repo.owner -> repo.name)
+    val userRepos = getUserRepositories(userName, true).map(repo => repo.owner -> repo.name)
     val page      = IssueSearchCondition.page(request)
 
     html.issues(
@@ -108,7 +108,9 @@ trait DashboardControllerBase extends ControllerBase {
         case _           => condition.copy(author    = Some(userName))
       },
       filter,
-      getGroupNames(userName))
+      getGroupNames(userName),
+      getVisibleRepositories(context.loginAccount, withoutPhysicalInfo = true),
+      getUserRepositories(userName, withoutPhysicalInfo = true))
   }
 
   private def searchPullRequests(filter: String) = {
@@ -131,7 +133,9 @@ trait DashboardControllerBase extends ControllerBase {
         case _           => condition.copy(author    = Some(userName))
       },
       filter,
-      getGroupNames(userName))
+      getGroupNames(userName),
+      getVisibleRepositories(context.loginAccount, withoutPhysicalInfo = true),
+      getUserRepositories(userName, withoutPhysicalInfo = true))
   }
 
 

src/main/scala/gitbucket/core/controller/FileUploadController.scala

@@ -1,18 +1,26 @@
 package gitbucket.core.controller
 
-import gitbucket.core.util.{Keys, FileUtil}
+import gitbucket.core.model.Account
+import gitbucket.core.service.{AccountService, RepositoryService}
+import gitbucket.core.servlet.Database
+import gitbucket.core.util._
 import gitbucket.core.util.ControlUtil._
 import gitbucket.core.util.Directory._
+import gitbucket.core.util.Implicits._
+import org.eclipse.jgit.api.Git
+import org.eclipse.jgit.dircache.DirCache
+import org.eclipse.jgit.lib.{FileMode, Constants}
+import org.scalatra
 import org.scalatra._
 import org.scalatra.servlet.{MultipartConfig, FileUploadSupport, FileItem}
-import org.apache.commons.io.FileUtils
+import org.apache.commons.io.{IOUtils, FileUtils}
 
 /**
  * Provides Ajax based file upload functionality.
  *
  * This servlet saves uploaded file.
  */
-class FileUploadController extends ScalatraServlet with FileUploadSupport {
+class FileUploadController extends ScalatraServlet with FileUploadSupport with RepositoryService with AccountService {
 
   configureMultipartHandling(MultipartConfig(maxFileSize = Some(3 * 1024 * 1024)))
 
@@ -31,6 +39,69 @@ class FileUploadController extends ScalatraServlet with FileUploadSupport {
     }, FileUtil.isUploadableType)
   }
 
+  post("/wiki/:owner/:repository"){
+    // Don't accept not logged-in users
+    session.get(Keys.Session.LoginAccount).collect { case loginAccount: Account =>
+      val owner      = params("owner")
+      val repository = params("repository")
+
+      // Check whether logged-in user is collaborator
+      collaboratorsOnly(owner, repository, loginAccount){
+        execute({ (file, fileId) =>
+          val fileName   = file.getName
+          LockUtil.lock(s"${owner}/${repository}/wiki") {
+            using(Git.open(Directory.getWikiRepositoryDir(owner, repository))) { git =>
+              val builder  = DirCache.newInCore.builder()
+              val inserter = git.getRepository.newObjectInserter()
+              val headId   = git.getRepository.resolve(Constants.HEAD + "^{commit}")
+
+              if(headId != null){
+                JGitUtil.processTree(git, headId){ (path, tree) =>
+                  if(path != fileName){
+                    builder.add(JGitUtil.createDirCacheEntry(path, tree.getEntryFileMode, tree.getEntryObjectId))
+                  }
+                }
+              }
+
+              val bytes = IOUtils.toByteArray(file.getInputStream)
+              builder.add(JGitUtil.createDirCacheEntry(fileName, FileMode.REGULAR_FILE, inserter.insert(Constants.OBJ_BLOB, bytes)))
+              builder.finish()
+
+              val newHeadId = JGitUtil.createNewCommit(git, inserter, headId, builder.getDirCache.writeTree(inserter),
+                Constants.HEAD, loginAccount.userName, loginAccount.mailAddress, s"Uploaded ${fileName}")
+
+              fileName
+            }
+          }
+        }, FileUtil.isImage)
+      }
+    } getOrElse BadRequest
+  }
+
+  post("/import") {
+    session.get(Keys.Session.LoginAccount).collect { case loginAccount: Account if loginAccount.isAdmin =>
+      execute({ (file, fileId) =>
+        if(file.getName.endsWith(".xml")){
+          import JDBCUtil._
+          val conn = request2Session(request).conn
+          conn.importAsXML(file.getInputStream)
+        } else {
+          throw new RuntimeException("Import is available for only the XML file.")
+        }
+      }, _ => true)
+    }
+    redirect("/admin/data")
+  }
+
+  private def collaboratorsOnly(owner: String, repository: String, loginAccount: Account)(action: => Any): Any = {
+    implicit val session = Database.getSession(request)
+    loginAccount match {
+      case x if(x.isAdmin) => action
+      case x if(getCollaborators(owner, repository).contains(x.userName)) => action
+      case _ => BadRequest
+    }
+  }
+
   private def execute(f: (FileItem, String) => Unit, mimeTypeChcker: (String) => Boolean) = fileParams.get("file") match {
     case Some(file) if(mimeTypeChcker(file.name)) =>
       defining(FileUtil.generateFileId){ fileId =>

src/main/scala/gitbucket/core/controller/IndexController.scala

@@ -1,36 +1,46 @@
 package gitbucket.core.controller
 
-import gitbucket.core.api._
 import gitbucket.core.helper.xml
-import gitbucket.core.html
 import gitbucket.core.model.Account
-import gitbucket.core.service.{RepositoryService, ActivityService, AccountService}
+import gitbucket.core.service._
 import gitbucket.core.util.Implicits._
-import gitbucket.core.util.{LDAPUtil, Keys, UsersAuthenticator}
+import gitbucket.core.util.ControlUtil._
+import gitbucket.core.util.{LDAPUtil, Keys, UsersAuthenticator, ReferrerAuthenticator, StringUtil}
 
 import io.github.gitbucket.scalatra.forms._
 
 
 class IndexController extends IndexControllerBase 
-  with RepositoryService with ActivityService with AccountService with UsersAuthenticator
+  with RepositoryService with ActivityService with AccountService with RepositorySearchService with IssuesService
+  with UsersAuthenticator with ReferrerAuthenticator
 
 
 trait IndexControllerBase extends ControllerBase {
-  self: RepositoryService with ActivityService with AccountService with UsersAuthenticator =>
+  self: RepositoryService with ActivityService with AccountService with RepositorySearchService
+    with UsersAuthenticator with ReferrerAuthenticator =>
 
   case class SignInForm(userName: String, password: String)
 
-  val form = mapping(
+  val signinForm = mapping(
     "userName" -> trim(label("Username", text(required))),
     "password" -> trim(label("Password", text(required)))
   )(SignInForm.apply)
 
+  val searchForm = mapping(
+    "query"      -> trim(text(required)),
+    "owner"      -> trim(text(required)),
+    "repository" -> trim(text(required))
+  )(SearchForm.apply)
+
+  case class SearchForm(query: String, owner: String, repository: String)
+
+
   get("/"){
     val loginAccount = context.loginAccount
     if(loginAccount.isEmpty) {
-        html.index(getRecentActivities(),
-            getVisibleRepositories(loginAccount, context.baseUrl, withoutPhysicalInfo = true),
-            loginAccount.map{ account => getUserRepositories(account.userName, context.baseUrl, withoutPhysicalInfo = true) }.getOrElse(Nil)
+        gitbucket.core.html.index(getRecentActivities(),
+            getVisibleRepositories(loginAccount, withoutPhysicalInfo = true),
+            loginAccount.map{ account => getUserRepositories(account.userName, withoutPhysicalInfo = true) }.getOrElse(Nil)
         )
     } else {
         val loginUserName = loginAccount.get.userName
@@ -39,9 +49,9 @@ trait IndexControllerBase extends ControllerBase {
         
         visibleOwnerSet ++= loginUserGroups
 
-        html.index(getRecentActivitiesByOwners(visibleOwnerSet),
-            getVisibleRepositories(loginAccount, context.baseUrl, withoutPhysicalInfo = true),
-            loginAccount.map{ account => getUserRepositories(account.userName, context.baseUrl, withoutPhysicalInfo = true) }.getOrElse(Nil) 
+        gitbucket.core.html.index(getRecentActivitiesByOwners(visibleOwnerSet),
+            getVisibleRepositories(loginAccount, withoutPhysicalInfo = true),
+            loginAccount.map{ account => getUserRepositories(account.userName, withoutPhysicalInfo = true) }.getOrElse(Nil) 
         )
     }
   }
@@ -51,10 +61,10 @@ trait IndexControllerBase extends ControllerBase {
     if(redirect.isDefined && redirect.get.startsWith("/")){
       flash += Keys.Flash.Redirect -> redirect.get
     }
-    html.signin()
+    gitbucket.core.html.signin()
   }
 
-  post("/signin", form){ form =>
+  post("/signin", signinForm){ form =>
     authenticate(context.settings, form.userName, form.password) match {
       case Some(account) => signin(account)
       case None          => redirect("/signin")
@@ -110,13 +120,40 @@ trait IndexControllerBase extends ControllerBase {
     getAccountByUserName(params("userName")).isDefined
   })
 
-  /**
-   * @see https://developer.github.com/v3/rate_limit/#get-your-current-rate-limit-status
-   * but not enabled.
-   */
-  get("/api/v3/rate_limit"){
-    contentType = formats("json")
-    // this message is same as github enterprise...
-    org.scalatra.NotFound(ApiError("Rate limiting is not enabled."))
+  // TODO Move to RepositoryViwerController?
+  post("/search", searchForm){ form =>
+    redirect(s"/${form.owner}/${form.repository}/search?q=${StringUtil.urlEncode(form.query)}")
   }
+
+  // TODO Move to RepositoryViwerController?
+  get("/:owner/:repository/search")(referrersOnly { repository =>
+    defining(params("q").trim, params.getOrElse("type", "code")){ case (query, target) =>
+      val page   = try {
+        val i = params.getOrElse("page", "1").toInt
+        if(i <= 0) 1 else i
+      } catch {
+        case e: NumberFormatException => 1
+      }
+
+      target.toLowerCase match {
+        case "issue" => gitbucket.core.search.html.issues(
+          countFiles(repository.owner, repository.name, query),
+          searchIssues(repository.owner, repository.name, query),
+          countWikiPages(repository.owner, repository.name, query),
+          query, page, repository)
+
+        case "wiki" => gitbucket.core.search.html.wiki(
+          countFiles(repository.owner, repository.name, query),
+          countIssues(repository.owner, repository.name, query),
+          searchWikiPages(repository.owner, repository.name, query),
+          query, page, repository)
+
+        case _ => gitbucket.core.search.html.code(
+          searchFiles(repository.owner, repository.name, query),
+          countIssues(repository.owner, repository.name, query),
+          countWikiPages(repository.owner, repository.name, query),
+          query, page, repository)
+      }
+    }
+  })
 }

src/main/scala/gitbucket/core/controller/IssuesController.scala

@@ -1,8 +1,6 @@
 package gitbucket.core.controller
 
-import gitbucket.core.api._
 import gitbucket.core.issues.html
-import gitbucket.core.model.Issue
 import gitbucket.core.service.IssuesService._
 import gitbucket.core.service._
 import gitbucket.core.util.ControlUtil._
@@ -16,11 +14,11 @@ import org.scalatra.Ok
 
 
 class IssuesController extends IssuesControllerBase
-  with IssuesService with RepositoryService with AccountService with LabelsService with MilestonesService with ActivityService
+  with IssuesService with RepositoryService with AccountService with LabelsService with MilestonesService with ActivityService with HandleCommentService
   with ReadableUsersAuthenticator with ReferrerAuthenticator with CollaboratorsAuthenticator with PullRequestService with WebHookIssueCommentService
 
 trait IssuesControllerBase extends ControllerBase {
-  self: IssuesService with RepositoryService with AccountService with LabelsService with MilestonesService with ActivityService
+  self: IssuesService with RepositoryService with AccountService with LabelsService with MilestonesService with ActivityService with HandleCommentService
     with ReadableUsersAuthenticator with ReferrerAuthenticator with CollaboratorsAuthenticator with PullRequestService with WebHookIssueCommentService =>
 
   case class IssueCreateForm(title: String, content: Option[String],
@@ -78,18 +76,6 @@ trait IssuesControllerBase extends ControllerBase {
     }
   })
 
-  /**
-   * https://developer.github.com/v3/issues/comments/#list-comments-on-an-issue
-   */
-  get("/api/v3/repos/:owner/:repository/issues/:id/comments")(referrersOnly { repository =>
-    (for{
-      issueId <- params("id").toIntOpt
-      comments = getCommentsForApi(repository.owner, repository.name, issueId.toInt)
-    } yield {
-      JsonFormat(comments.map{ case (issueComment, user, issue) => ApiComment(issueComment, RepositoryName(repository), issueId, ApiUser(user), issue.isPullRequest) })
-    }).getOrElse(NotFound)
-  })
-
   get("/:owner/:repository/issues/new")(readableUsersOnly { repository =>
     defining(repository.owner, repository.name){ case (owner, name) =>
       html.create(
@@ -128,7 +114,7 @@ trait IssuesControllerBase extends ControllerBase {
 
       getIssue(owner, name, issueId.toString).foreach { issue =>
         // extract references and create refer comment
-        createReferComment(owner, name, issue, form.title + " " + form.content.getOrElse(""))
+        createReferComment(owner, name, issue, form.title + " " + form.content.getOrElse(""), context.loginAccount.get)
 
         // call web hooks
         callIssuesWebHook("opened", repository, issue, context.baseUrl, context.loginAccount.get)
@@ -150,7 +136,7 @@ trait IssuesControllerBase extends ControllerBase {
           // update issue
           updateIssue(owner, name, issue.issueId, title, issue.content)
           // extract references and create refer comment
-          createReferComment(owner, name, issue.copy(title = title), title)
+          createReferComment(owner, name, issue.copy(title = title), title, context.loginAccount.get)
 
           redirect(s"/${owner}/${name}/issues/_data/${issue.issueId}")
         } else Unauthorized
@@ -165,7 +151,7 @@ trait IssuesControllerBase extends ControllerBase {
           // update issue
           updateIssue(owner, name, issue.issueId, issue.title, content)
           // extract references and create refer comment
-          createReferComment(owner, name, issue, content.getOrElse(""))
+          createReferComment(owner, name, issue, content.getOrElse(""), context.loginAccount.get)
 
           redirect(s"/${owner}/${name}/issues/_data/${issue.issueId}")
         } else Unauthorized
@@ -174,30 +160,22 @@ trait IssuesControllerBase extends ControllerBase {
   })
 
   post("/:owner/:repository/issue_comments/new", commentForm)(readableUsersOnly { (form, repository) =>
-    handleComment(form.issueId, Some(form.content), repository)() map { case (issue, id) =>
-      redirect(s"/${repository.owner}/${repository.name}/${
-        if(issue.isPullRequest) "pull" else "issues"}/${form.issueId}#comment-${id}")
+    getIssue(repository.owner, repository.name, form.issueId.toString).flatMap { issue =>
+      val actionOpt = params.get("action").filter(_ => isEditable(issue.userName, issue.repositoryName, issue.openedUserName))
+      handleComment(issue, Some(form.content), repository, actionOpt) map { case (issue, id) =>
+        redirect(s"/${repository.owner}/${repository.name}/${
+          if(issue.isPullRequest) "pull" else "issues"}/${form.issueId}#comment-${id}")
+      }
     } getOrElse NotFound
   })
 
-  /**
-   * https://developer.github.com/v3/issues/comments/#create-a-comment
-   */
-  post("/api/v3/repos/:owner/:repository/issues/:id/comments")(readableUsersOnly { repository =>
-    (for{
-      issueId <- params("id").toIntOpt
-      body <- extractFromJsonBody[CreateAComment].map(_.body) if ! body.isEmpty
-      (issue, id) <- handleComment(issueId, Some(body), repository)()
-      issueComment <- getComment(repository.owner, repository.name, id.toString())
-    } yield {
-      JsonFormat(ApiComment(issueComment, RepositoryName(repository), issueId, ApiUser(context.loginAccount.get), issue.isPullRequest))
-    }) getOrElse NotFound
-  })
-
   post("/:owner/:repository/issue_comments/state", issueStateForm)(readableUsersOnly { (form, repository) =>
-    handleComment(form.issueId, form.content, repository)() map { case (issue, id) =>
-      redirect(s"/${repository.owner}/${repository.name}/${
-        if(issue.isPullRequest) "pull" else "issues"}/${form.issueId}#comment-${id}")
+    getIssue(repository.owner, repository.name, form.issueId.toString).flatMap { issue =>
+      val actionOpt = params.get("action").filter(_ => isEditable(issue.userName, issue.repositoryName, issue.openedUserName))
+      handleComment(issue, form.content, repository, actionOpt) map { case (issue, id) =>
+        redirect(s"/${repository.owner}/${repository.name}/${
+          if(issue.isPullRequest) "pull" else "issues"}/${form.issueId}#comment-${id}")
+      }
     } getOrElse NotFound
   })
 
@@ -315,8 +293,16 @@ trait IssuesControllerBase extends ControllerBase {
   post("/:owner/:repository/issues/batchedit/state")(collaboratorsOnly { repository =>
     defining(params.get("value")){ action =>
       action match {
-        case Some("open")  => executeBatch(repository) { handleComment(_, None, repository)( _ => Some("reopen")) }
-        case Some("close") => executeBatch(repository) { handleComment(_, None, repository)( _ => Some("close"))  }
+        case Some("open")  => executeBatch(repository) { issueId =>
+          getIssue(repository.owner, repository.name, issueId.toString).foreach { issue =>
+            handleComment(issue, None, repository, Some("reopen"))
+          }
+        }
+        case Some("close") => executeBatch(repository) { issueId =>
+          getIssue(repository.owner, repository.name, issueId.toString).foreach { issue =>
+            handleComment(issue, None, repository, Some("close"))
+          }
+        }
         case _ => // TODO BadRequest
       }
     }
@@ -373,99 +359,6 @@ trait IssuesControllerBase extends ControllerBase {
     }
   }
 
-  // TODO Same method exists in PullRequestController. Should it moved to IssueService?
-  private def createReferComment(owner: String, repository: String, fromIssue: Issue, message: String) = {
-    StringUtil.extractIssueId(message).foreach { issueId =>
-      val content = fromIssue.issueId + ":" + fromIssue.title
-      if(getIssue(owner, repository, issueId).isDefined){
-        // Not add if refer comment already exist.
-        if(!getComments(owner, repository, issueId.toInt).exists { x => x.action == "refer" && x.content == content }) {
-          createComment(owner, repository, context.loginAccount.get.userName, issueId.toInt, content, "refer")
-        }
-      }
-    }
-  }
-
-  /**
-   * @see [[https://github.com/takezoe/gitbucket/wiki/CommentAction]]
-   */
-  private def handleComment(issueId: Int, content: Option[String], repository: RepositoryService.RepositoryInfo)
-      (getAction: Issue => Option[String] =
-           p1 => params.get("action").filter(_ => isEditable(p1.userName, p1.repositoryName, p1.openedUserName))) = {
-
-    defining(repository.owner, repository.name){ case (owner, name) =>
-      val userName = context.loginAccount.get.userName
-
-      getIssue(owner, name, issueId.toString) flatMap { issue =>
-        val (action, recordActivity) =
-          getAction(issue)
-            .collect {
-              case "close" if(!issue.closed) => true  ->
-                (Some("close")  -> Some(if(issue.isPullRequest) recordClosePullRequestActivity _ else recordCloseIssueActivity _))
-              case "reopen" if(issue.closed) => false ->
-                (Some("reopen") -> Some(recordReopenIssueActivity _))
-            }
-            .map { case (closed, t) =>
-              updateClosed(owner, name, issueId, closed)
-              t
-            }
-            .getOrElse(None -> None)
-
-        val commentId = (content, action) match {
-          case (None, None) => None
-          case (None, Some(action)) => Some(createComment(owner, name, userName, issueId, action.capitalize, action))
-          case (Some(content), _) => Some(createComment(owner, name, userName, issueId, content, action.map(_+ "_comment").getOrElse("comment")))
-        }
-
-        // record comment activity if comment is entered
-        content foreach {
-          (if(issue.isPullRequest) recordCommentPullRequestActivity _ else recordCommentIssueActivity _)
-          (owner, name, userName, issueId, _)
-        }
-        recordActivity foreach ( _ (owner, name, userName, issueId, issue.title) )
-
-        // extract references and create refer comment
-        content.map { content =>
-          createReferComment(owner, name, issue, content)
-        }
-
-        // call web hooks
-        action match {
-          case None => commentId.map{ commentIdSome => callIssueCommentWebHook(repository, issue, commentIdSome, context.loginAccount.get) }
-          case Some(act) => val webHookAction = act match {
-            case "open"   => "opened"
-            case "reopen" => "reopened"
-            case "close"  => "closed"
-            case _ => act
-          }
-          if(issue.isPullRequest){
-            callPullRequestWebHook(webHookAction, repository, issue.issueId, context.baseUrl, context.loginAccount.get)
-          } else {
-            callIssuesWebHook(webHookAction, repository, issue, context.baseUrl, context.loginAccount.get)
-          }
-        }
-
-        // notifications
-        Notifier() match {
-          case f =>
-            content foreach {
-              f.toNotify(repository, issue, _){
-                Notifier.msgComment(s"${context.baseUrl}/${owner}/${name}/${
-                  if(issue.isPullRequest) "pull" else "issues"}/${issueId}#comment-${commentId.get}")
-              }
-            }
-            action foreach {
-              f.toNotify(repository, issue, _){
-                Notifier.msgStatus(s"${context.baseUrl}/${owner}/${name}/issues/${issueId}")
-              }
-            }
-        }
-
-        commentId.map( issue -> _ )
-      }
-    }
-  }
-
   private def searchIssues(repository: RepositoryService.RepositoryInfo) = {
     defining(repository.owner, repository.name){ case (owner, repoName) =>
       val page       = IssueSearchCondition.page(request)

src/main/scala/gitbucket/core/controller/LabelsController.scala

@@ -1,13 +1,12 @@
 package gitbucket.core.controller
 
-import gitbucket.core.api.{ApiError, CreateALabel, ApiLabel, JsonFormat}
 import gitbucket.core.issues.labels.html
 import gitbucket.core.service.{RepositoryService, AccountService, IssuesService, LabelsService}
-import gitbucket.core.util.{LockUtil, RepositoryName, ReferrerAuthenticator, CollaboratorsAuthenticator}
+import gitbucket.core.util.{ReferrerAuthenticator, CollaboratorsAuthenticator}
 import gitbucket.core.util.Implicits._
 import io.github.gitbucket.scalatra.forms._
 import org.scalatra.i18n.Messages
-import org.scalatra.{NoContent, UnprocessableEntity, Created, Ok}
+import org.scalatra.Ok
 
 class LabelsController extends LabelsControllerBase
   with LabelsService with IssuesService with RepositoryService with AccountService
@@ -24,6 +23,7 @@ trait LabelsControllerBase extends ControllerBase {
     "labelColor" -> trim(label("Color",      text(required, color)))
   )(LabelForm.apply)
 
+
   get("/:owner/:repository/issues/labels")(referrersOnly { repository =>
     html.list(
       getLabels(repository.owner, repository.name),
@@ -32,26 +32,6 @@ trait LabelsControllerBase extends ControllerBase {
       hasWritePermission(repository.owner, repository.name, context.loginAccount))
   })
 
-  /**
-    * List all labels for this repository
-    * https://developer.github.com/v3/issues/labels/#list-all-labels-for-this-repository
-    */
-  get("/api/v3/repos/:owner/:repository/labels")(referrersOnly { repository =>
-    JsonFormat(getLabels(repository.owner, repository.name).map { label =>
-      ApiLabel(label, RepositoryName(repository))
-    })
-  })
-
-  /**
-    * Get a single label
-    * https://developer.github.com/v3/issues/labels/#get-a-single-label
-    */
-  get("/api/v3/repos/:owner/:repository/labels/:labelName")(referrersOnly { repository =>
-    getLabel(repository.owner, repository.name, params("labelName")).map { label =>
-      JsonFormat(ApiLabel(label, RepositoryName(repository)))
-    } getOrElse NotFound()
-  })
-
   ajaxGet("/:owner/:repository/issues/labels/new")(collaboratorsOnly { repository =>
     html.edit(None, repository)
   })
@@ -66,31 +46,6 @@ trait LabelsControllerBase extends ControllerBase {
       hasWritePermission(repository.owner, repository.name, context.loginAccount))
   })
 
-  /**
-    * Create a label
-    * https://developer.github.com/v3/issues/labels/#create-a-label
-    */
-  post("/api/v3/repos/:owner/:repository/labels")(collaboratorsOnly { repository =>
-    (for{
-      data <- extractFromJsonBody[CreateALabel] if data.isValid
-    } yield {
-      LockUtil.lock(RepositoryName(repository).fullName) {
-        if (getLabel(repository.owner, repository.name, data.name).isEmpty) {
-          val labelId = createLabel(repository.owner, repository.name, data.name, data.color)
-          getLabel(repository.owner, repository.name, labelId).map { label =>
-            Created(JsonFormat(ApiLabel(label, RepositoryName(repository))))
-          } getOrElse NotFound()
-        } else {
-          // TODO ApiError should support errors field to enhance compatibility of GitHub API
-          UnprocessableEntity(ApiError(
-            "Validation Failed",
-            Some("https://developer.github.com/v3/issues/labels/#create-a-label")
-          ))
-        }
-      }
-    }) getOrElse NotFound()
-  })
-
   ajaxGet("/:owner/:repository/issues/labels/:labelId/edit")(collaboratorsOnly { repository =>
     getLabel(repository.owner, repository.name, params("labelId").toInt).map { label =>
       html.edit(Some(label), repository)
@@ -107,50 +62,11 @@ trait LabelsControllerBase extends ControllerBase {
       hasWritePermission(repository.owner, repository.name, context.loginAccount))
   })
 
-  /**
-    * Update a label
-    * https://developer.github.com/v3/issues/labels/#update-a-label
-    */
-  patch("/api/v3/repos/:owner/:repository/labels/:labelName")(collaboratorsOnly { repository =>
-    (for{
-      data <- extractFromJsonBody[CreateALabel] if data.isValid
-    } yield {
-      LockUtil.lock(RepositoryName(repository).fullName) {
-        getLabel(repository.owner, repository.name, params("labelName")).map { label =>
-          if (getLabel(repository.owner, repository.name, data.name).isEmpty) {
-            updateLabel(repository.owner, repository.name, label.labelId, data.name, data.color)
-            JsonFormat(ApiLabel(
-              getLabel(repository.owner, repository.name, label.labelId).get,
-              RepositoryName(repository)))
-          } else {
-            // TODO ApiError should support errors field to enhance compatibility of GitHub API
-            UnprocessableEntity(ApiError(
-              "Validation Failed",
-              Some("https://developer.github.com/v3/issues/labels/#create-a-label")))
-          }
-        } getOrElse NotFound()
-      }
-    }) getOrElse NotFound()
-  })
-
   ajaxPost("/:owner/:repository/issues/labels/:labelId/delete")(collaboratorsOnly { repository =>
     deleteLabel(repository.owner, repository.name, params("labelId").toInt)
     Ok()
   })
 
-  /**
-    * Delete a label
-    * https://developer.github.com/v3/issues/labels/#delete-a-label
-    */
-  delete("/api/v3/repos/:owner/:repository/labels/:labelName")(collaboratorsOnly { repository =>
-    LockUtil.lock(RepositoryName(repository).fullName) {
-      getLabel(repository.owner, repository.name, params("labelName")).map { label =>
-        deleteLabel(repository.owner, repository.name, label.labelId)
-        NoContent()
-      } getOrElse NotFound()
-    }
-  })
-
   /**
    * Constraint for the identifier such as user name, repository name or page name.
    */
@@ -169,7 +85,11 @@ trait LabelsControllerBase extends ControllerBase {
     override def validate(name: String, value: String, params: Map[String, String], messages: Messages): Option[String] = {
       val owner = params("owner")
       val repository = params("repository")
-      getLabel(owner, repository, value).map(_ => "Name has already been taken.")
+      params.get("labelId").map { labelId =>
+        getLabel(owner, repository, value).filter(_.labelId != labelId.toInt).map(_ => "Name has already been taken.")
+      }.getOrElse {
+        getLabel(owner, repository, value).map(_ => "Name has already been taken.")
+      }
     }
   }
 

src/main/scala/gitbucket/core/controller/PluginsController.scala

@@ -1,11 +0,0 @@
-package gitbucket.core.controller
-
-import gitbucket.core.admin.plugins.html
-import gitbucket.core.plugin.PluginRegistry
-import gitbucket.core.util.AdminAuthenticator
-
-class PluginsController extends ControllerBase with AdminAuthenticator {
-  get("/admin/plugins")(adminOnly {
-    html.plugins(PluginRegistry().getPlugins())
-  })
-}

src/main/scala/gitbucket/core/controller/PullRequestsController.scala

@@ -1,7 +1,6 @@
 package gitbucket.core.controller
 
-import gitbucket.core.api._
-import gitbucket.core.model.{Account, CommitStatus, CommitState, Repository, PullRequest, Issue, WebHook}
+import gitbucket.core.model.WebHook
 import gitbucket.core.pulls.html
 import gitbucket.core.service.CommitStatusService
 import gitbucket.core.service.MergeService
@@ -82,24 +81,6 @@ trait PullRequestsControllerBase extends ControllerBase {
     }
   })
 
-  /**
-   * https://developer.github.com/v3/pulls/#list-pull-requests
-   */
-  get("/api/v3/repos/:owner/:repository/pulls")(referrersOnly { repository =>
-    val page       = IssueSearchCondition.page(request)
-    // TODO: more api spec condition
-    val condition = IssueSearchCondition(request)
-    val baseOwner = getAccountByUserName(repository.owner).get
-    val issues:List[(Issue, Account, Int, PullRequest, Repository, Account)] = searchPullRequestByApi(condition, (page - 1) * PullRequestLimit, PullRequestLimit, repository.owner -> repository.name)
-    JsonFormat(issues.map{case (issue, issueUser, commentCount, pullRequest, headRepo, headOwner) =>
-      ApiPullRequest(
-        issue,
-        pullRequest,
-        ApiRepository(headRepo, ApiUser(headOwner)),
-        ApiRepository(repository, ApiUser(baseOwner)),
-        ApiUser(issueUser)) })
-  })
-
   get("/:owner/:repository/pull/:id")(referrersOnly { repository =>
     params("id").toIntOpt.flatMap{ issueId =>
       val owner = repository.owner
@@ -126,47 +107,6 @@ trait PullRequestsControllerBase extends ControllerBase {
     } getOrElse NotFound
   })
 
-  /**
-   * https://developer.github.com/v3/pulls/#get-a-single-pull-request
-   */
-  get("/api/v3/repos/:owner/:repository/pulls/:id")(referrersOnly { repository =>
-    (for{
-      issueId <- params("id").toIntOpt
-      (issue, pullRequest) <- getPullRequest(repository.owner, repository.name, issueId)
-      users = getAccountsByUserNames(Set(repository.owner, pullRequest.requestUserName, issue.openedUserName), Set())
-      baseOwner <- users.get(repository.owner)
-      headOwner <- users.get(pullRequest.requestUserName)
-      issueUser <- users.get(issue.openedUserName)
-      headRepo  <- getRepository(pullRequest.requestUserName, pullRequest.requestRepositoryName, baseUrl)
-    } yield {
-      JsonFormat(ApiPullRequest(
-        issue,
-        pullRequest,
-        ApiRepository(headRepo, ApiUser(headOwner)),
-        ApiRepository(repository, ApiUser(baseOwner)),
-        ApiUser(issueUser)))
-    }).getOrElse(NotFound)
-  })
-
-  /**
-   * https://developer.github.com/v3/pulls/#list-commits-on-a-pull-request
-   */
-  get("/api/v3/repos/:owner/:repository/pulls/:id/commits")(referrersOnly { repository =>
-    val owner = repository.owner
-    val name = repository.name
-    params("id").toIntOpt.flatMap{ issueId =>
-      getPullRequest(owner, name, issueId) map { case(issue, pullreq) =>
-        using(Git.open(getRepositoryDir(owner, name))){ git =>
-          val oldId = git.getRepository.resolve(pullreq.commitIdFrom)
-          val newId = git.getRepository.resolve(pullreq.commitIdTo)
-          val repoFullName = RepositoryName(repository)
-          val commits = git.log.addRange(oldId, newId).call.iterator.asScala.map(c => ApiCommitListItem(new CommitInfo(c), repoFullName)).toList
-          JsonFormat(commits)
-        }
-      }
-    } getOrElse NotFound
-  })
-
   ajaxGet("/:owner/:repository/pull/:id/mergeguide")(referrersOnly { repository =>
     params("id").toIntOpt.flatMap{ issueId =>
       val owner = repository.owner
@@ -196,7 +136,7 @@ trait PullRequestsControllerBase extends ControllerBase {
           issue,
           pullreq,
           repository,
-          getRepository(pullreq.requestUserName, pullreq.requestRepositoryName, context.baseUrl).get)
+          getRepository(pullreq.requestUserName, pullreq.requestRepositoryName).get)
       }
     } getOrElse NotFound
   })
@@ -229,7 +169,7 @@ trait PullRequestsControllerBase extends ControllerBase {
       if(branchProtection.needStatusCheck(loginAccount.userName)){
         flash += "error" -> s"branch ${pullreq.requestBranch} is protected need status check."
       } else {
-        val repository = getRepository(owner, name, context.baseUrl).get
+        val repository = getRepository(owner, name).get
         LockUtil.lock(s"${owner}/${name}"){
           val alias = if(pullreq.repositoryName == pullreq.requestRepositoryName && pullreq.userName == pullreq.requestUserName){
             pullreq.branch
@@ -238,7 +178,7 @@ trait PullRequestsControllerBase extends ControllerBase {
           }
           val existIds = using(Git.open(Directory.getRepositoryDir(owner, name))) { git => JGitUtil.getAllCommitIds(git) }.toSet
           pullRemote(owner, name, pullreq.requestBranch, pullreq.userName, pullreq.repositoryName, pullreq.branch, loginAccount,
-                     "Merge branch '${alias}' into ${pullreq.requestBranch}") match {
+                     s"Merge branch '${alias}' into ${pullreq.requestBranch}") match {
             case None => // conflict
               flash += "error" -> s"Can't automatic merging branch '${alias}' into ${pullreq.requestBranch}."
             case Some(oldId) =>
@@ -310,7 +250,7 @@ trait PullRequestsControllerBase extends ControllerBase {
               pullreq.requestUserName, pullreq.requestRepositoryName, pullreq.commitIdTo)
 
             // close issue by content of pull request
-            val defaultBranch = getRepository(owner, name, context.baseUrl).get.repository.defaultBranch
+            val defaultBranch = getRepository(owner, name).get.repository.defaultBranch
             if(pullreq.branch == defaultBranch){
               commits.flatten.foreach { commit =>
                 closeIssuesFromMessage(commit.fullMessage, loginAccount.userName, owner, name)
@@ -343,7 +283,7 @@ trait PullRequestsControllerBase extends ControllerBase {
     val headBranch:Option[String] = params.get("head")
     (forkedRepository.repository.originUserName, forkedRepository.repository.originRepositoryName) match {
       case (Some(originUserName), Some(originRepositoryName)) => {
-        getRepository(originUserName, originRepositoryName, context.baseUrl).map { originRepository =>
+        getRepository(originUserName, originRepositoryName).map { originRepository =>
           using(
             Git.open(getRepositoryDir(originUserName, originRepositoryName)),
             Git.open(getRepositoryDir(forkedRepository.owner, forkedRepository.name))
@@ -384,12 +324,12 @@ trait PullRequestsControllerBase extends ControllerBase {
         forkedRepository.repository.originRepositoryName
       } else {
         // Sibling repository
-        getUserRepositories(originOwner, context.baseUrl).find { x =>
+        getUserRepositories(originOwner).find { x =>
           x.repository.originUserName == forkedRepository.repository.originUserName &&
             x.repository.originRepositoryName == forkedRepository.repository.originRepositoryName
         }.map(_.repository.repositoryName)
       };
-      originRepository <- getRepository(originOwner, originRepositoryName, context.baseUrl)
+      originRepository <- getRepository(originOwner, originRepositoryName)
     ) yield {
       using(
         Git.open(getRepositoryDir(originRepository.owner, originRepository.name)),
@@ -457,7 +397,7 @@ trait PullRequestsControllerBase extends ControllerBase {
           getForkedRepositories(forkedRepository.owner, forkedRepository.name).find(_._1 == originOwner).map(_._2)
         }
       };
-      originRepository <- getRepository(originOwner, originRepositoryName, context.baseUrl)
+      originRepository <- getRepository(originOwner, originRepositoryName)
     ) yield {
       using(
         Git.open(getRepositoryDir(originRepository.owner, originRepository.name)),
@@ -523,7 +463,7 @@ trait PullRequestsControllerBase extends ControllerBase {
 
       getIssue(owner, name, issueId.toString) foreach { issue =>
         // extract references and create refer comment
-        createReferComment(owner, name, issue, form.title + " " + form.content.getOrElse(""))
+        createReferComment(owner, name, issue, form.title + " " + form.content.getOrElse(""), context.loginAccount.get)
 
         // notifications
         Notifier().toNotify(repository, issue, form.content.getOrElse("")){
@@ -535,19 +475,6 @@ trait PullRequestsControllerBase extends ControllerBase {
     }
   })
 
-  // TODO Same method exists in IssueController. Should it moved to IssueService?
-  private def createReferComment(owner: String, repository: String, fromIssue: Issue, message: String) = {
-    StringUtil.extractIssueId(message).foreach { issueId =>
-      val content = fromIssue.issueId + ":" + fromIssue.title
-      if(getIssue(owner, repository, issueId).isDefined){
-        // Not add if refer comment already exist.
-        if(!getComments(owner, repository, issueId.toInt).exists { x => x.action == "refer" && x.content == content }) {
-          createComment(owner, repository, context.loginAccount.get.userName, issueId.toInt, content, "refer")
-        }
-      }
-    }
-  }
-
   /**
    * Parses branch identifier and extracts owner and branch name as tuple.
    *
@@ -611,14 +538,4 @@ trait PullRequestsControllerBase extends ControllerBase {
         hasWritePermission(owner, repoName, context.loginAccount))
     }
 
-  // TODO: same as gitbucket.core.servlet.CommitLogHook ...
-  private def createIssueComment(owner: String, repository: String, commit: CommitInfo) = {
-    StringUtil.extractIssueId(commit.fullMessage).foreach { issueId =>
-      if(getIssue(owner, repository, issueId).isDefined){
-        getAccountByMailAddress(commit.committerEmailAddress).foreach { account =>
-          createComment(owner, repository, account.userName, issueId.toInt, commit.fullMessage + " " + commit.id, "commit")
-        }
-      }
-    }
-  }
 }

src/main/scala/gitbucket/core/controller/RepositorySettingsController.scala

@@ -15,6 +15,7 @@ import org.scalatra.i18n.Messages
 import org.eclipse.jgit.api.Git
 import org.eclipse.jgit.lib.Constants
 import org.eclipse.jgit.lib.ObjectId
+import gitbucket.core.model.WebHookContentType
 
 
 class RepositorySettingsController extends RepositorySettingsControllerBase
@@ -49,12 +50,16 @@ trait RepositorySettingsControllerBase extends ControllerBase {
   )(CollaboratorForm.apply)
 
   // for web hook url addition
-  case class WebHookForm(url: String, events: Set[WebHook.Event])
+  case class WebHookForm(url: String, events: Set[WebHook.Event], ctype: WebHookContentType, token: Option[String])
 
   def webHookForm(update:Boolean) = mapping(
     "url"    -> trim(label("url", text(required, webHook(update)))),
-    "events" -> webhookEvents
-  )(WebHookForm.apply)
+    "events" -> webhookEvents,
+    "ctype" -> label("ctype", text()),
+    "token" -> optional(trim(label("token", text(maxlength(100)))))
+  )(
+    (url, events, ctype, token) => WebHookForm(url, events, WebHookContentType.valueOf(ctype), token)
+  )
 
   // for transfer ownership
   case class TransferOwnerShipForm(newOwner: String)
@@ -141,22 +146,6 @@ trait RepositorySettingsControllerBase extends ControllerBase {
     }
   })
 
-  /** https://developer.github.com/v3/repos/#enabling-and-disabling-branch-protection */
-  patch("/api/v3/repos/:owner/:repo/branches/:branch")(ownerOnly { repository =>
-    import gitbucket.core.api._
-    (for{
-      branch <- params.get("branch") if repository.branchList.find(_ == branch).isDefined
-      protection <- extractFromJsonBody[ApiBranchProtection.EnablingAndDisabling].map(_.protection)
-    } yield {
-      if(protection.enabled){
-        enableBranchProtection(repository.owner, repository.name, branch, protection.status.enforcement_level == ApiBranchProtection.Everyone, protection.status.contexts)
-      } else {
-        disableBranchProtection(repository.owner, repository.name, branch)
-      }
-      JsonFormat(ApiBranch(branch, protection)(RepositoryName(repository)))
-    }) getOrElse NotFound
-  })
-
   /**
    * Display the Collaborators page.
    */
@@ -198,7 +187,7 @@ trait RepositorySettingsControllerBase extends ControllerBase {
    * Display the web hook edit page.
    */
   get("/:owner/:repository/settings/hooks/new")(ownerOnly { repository =>
-    val webhook = WebHook(repository.owner, repository.name, "")
+    val webhook = WebHook(repository.owner, repository.name, "", WebHookContentType.FORM, None)
     html.edithooks(webhook, Set(WebHook.Push), repository, flash.get("info"), true)
   })
 
@@ -206,7 +195,7 @@ trait RepositorySettingsControllerBase extends ControllerBase {
    * Add the web hook URL.
    */
   post("/:owner/:repository/settings/hooks/new", webHookForm(false))(ownerOnly { (form, repository) =>
-    addWebHook(repository.owner, repository.name, form.url, form.events)
+    addWebHook(repository.owner, repository.name, form.url, form.events, form.ctype, form.token)
     flash += "info" -> s"Webhook ${form.url} created"
     redirect(s"/${repository.owner}/${repository.name}/settings/hooks")
   })
@@ -235,7 +224,9 @@ trait RepositorySettingsControllerBase extends ControllerBase {
       import scala.concurrent.ExecutionContext.Implicits.global
 
       val url = params("url")
-      val dummyWebHookInfo = WebHook(repository.owner, repository.name, url)
+      val token = Some(params("token"))
+      val ctype = WebHookContentType.valueOf(params("ctype"))
+      val dummyWebHookInfo = WebHook(repository.owner, repository.name, url, ctype, token)
       val dummyPayload = {
         val ownerAccount = getAccountByUserName(repository.owner).get
         val commits = if(repository.commitCount == 0) List.empty else git.log
@@ -294,7 +285,7 @@ trait RepositorySettingsControllerBase extends ControllerBase {
    * Update web hook settings.
    */
   post("/:owner/:repository/settings/hooks/edit", webHookForm(true))(ownerOnly { (form, repository) =>
-    updateWebHook(repository.owner, repository.name, form.url, form.events)
+    updateWebHook(repository.owner, repository.name, form.url, form.events, form.ctype, form.token)
     flash += "info" -> s"webhook ${form.url} updated"
     redirect(s"/${repository.owner}/${repository.name}/settings/hooks")
   })

src/main/scala/gitbucket/core/controller/RepositoryViewerController.scala

@@ -2,7 +2,6 @@ package gitbucket.core.controller
 
 import javax.servlet.http.{HttpServletResponse, HttpServletRequest}
 
-import gitbucket.core.api._
 import gitbucket.core.plugin.PluginRegistry
 import gitbucket.core.repo.html
 import gitbucket.core.helper
@@ -13,7 +12,7 @@ import gitbucket.core.util.StringUtil._
 import gitbucket.core.util.ControlUtil._
 import gitbucket.core.util.Implicits._
 import gitbucket.core.util.Directory._
-import gitbucket.core.model.{Account, CommitState, WebHook}
+import gitbucket.core.model.{Account, WebHook}
 import gitbucket.core.service.WebHookService._
 import gitbucket.core.view
 import gitbucket.core.view.helpers
@@ -122,13 +121,6 @@ trait RepositoryViewerControllerBase extends ControllerBase {
     fileList(_)
   })
 
-  /**
-   * https://developer.github.com/v3/repos/#get
-   */
-  get("/api/v3/repos/:owner/:repository")(referrersOnly { repository =>
-    JsonFormat(ApiRepository(repository, ApiUser(getAccountByUserName(repository.owner).get)))
-  })
-
   /**
    * Displays the file list of the specified path and branch.
    */
@@ -160,65 +152,6 @@ trait RepositoryViewerControllerBase extends ControllerBase {
     }
   })
 
-  /**
-   * https://developer.github.com/v3/repos/statuses/#create-a-status
-   */
-  post("/api/v3/repos/:owner/:repo/statuses/:sha")(collaboratorsOnly { repository =>
-    (for{
-      ref <- params.get("sha")
-      sha <- JGitUtil.getShaByRef(repository.owner, repository.name, ref)
-      data <- extractFromJsonBody[CreateAStatus] if data.isValid
-      creator <- context.loginAccount
-      state <- CommitState.valueOf(data.state)
-      statusId = createCommitStatus(repository.owner, repository.name, sha, data.context.getOrElse("default"),
-                                    state, data.target_url, data.description, new java.util.Date(), creator)
-      status <- getCommitStatus(repository.owner, repository.name, statusId)
-    } yield {
-      JsonFormat(ApiCommitStatus(status, ApiUser(creator)))
-    }) getOrElse NotFound
-  })
-
-  /**
-   * https://developer.github.com/v3/repos/statuses/#list-statuses-for-a-specific-ref
-   *
-   * ref is Ref to list the statuses from. It can be a SHA, a branch name, or a tag name.
-   */
-  val listStatusesRoute = get("/api/v3/repos/:owner/:repo/commits/:ref/statuses")(referrersOnly { repository =>
-    (for{
-      ref <- params.get("ref")
-      sha <- JGitUtil.getShaByRef(repository.owner, repository.name, ref)
-    } yield {
-      JsonFormat(getCommitStatuesWithCreator(repository.owner, repository.name, sha).map{ case(status, creator) =>
-        ApiCommitStatus(status, ApiUser(creator))
-      })
-    }) getOrElse NotFound
-  })
-
-  /**
-   * https://developer.github.com/v3/repos/statuses/#list-statuses-for-a-specific-ref
-   *
-   * legacy route
-   */
-  get("/api/v3/repos/:owner/:repo/statuses/:ref"){
-    listStatusesRoute.action()
-  }
-
-  /**
-   * https://developer.github.com/v3/repos/statuses/#get-the-combined-status-for-a-specific-ref
-   *
-   * ref is Ref to list the statuses from. It can be a SHA, a branch name, or a tag name.
-   */
-  get("/api/v3/repos/:owner/:repo/commits/:ref/status")(referrersOnly { repository =>
-    (for{
-      ref <- params.get("ref")
-      owner <- getAccountByUserName(repository.owner)
-      sha <- JGitUtil.getShaByRef(repository.owner, repository.name, ref)
-    } yield {
-      val statuses = getCommitStatuesWithCreator(repository.owner, repository.name, sha)
-      JsonFormat(ApiCombinedCommitStatus(sha, statuses, ApiRepository(repository, owner)))
-    }) getOrElse NotFound
-  })
-
   get("/:owner/:repository/new/*")(collaboratorsOnly { repository =>
     val (branch, path) = splitPath(repository, multiParams("splat").head)
     val protectedBranch = getProtectedBranchInfo(repository.owner, repository.name, branch).needStatusCheck(context.loginAccount.get.userName)
@@ -560,11 +493,14 @@ trait RepositoryViewerControllerBase extends ControllerBase {
     html.forked(
       getRepository(
         repository.repository.originUserName.getOrElse(repository.owner),
-        repository.repository.originRepositoryName.getOrElse(repository.name),
-        context.baseUrl),
+        repository.repository.originRepositoryName.getOrElse(repository.name)),
       getForkedRepositories(
         repository.repository.originUserName.getOrElse(repository.owner),
         repository.repository.originRepositoryName.getOrElse(repository.name)),
+      context.loginAccount match {
+        case None => List()
+        case account: Option[Account] => getGroupsByUserName(account.get.userName)
+      }, // groups of current user
       repository)
   })
 
@@ -575,13 +511,7 @@ trait RepositoryViewerControllerBase extends ControllerBase {
     using(Git.open(getRepositoryDir(repository.owner, repository.name))){ git =>
       val ref = multiParams("splat").head
       JGitUtil.getTreeId(git, ref).map{ treeId =>
-        html.find(ref,
-                  treeId,
-                  repository,
-                  context.loginAccount match {
-                    case None => List()
-                    case account: Option[Account] => getGroupsByUserName(account.get.userName)
-                  })
+        html.find(ref, treeId, repository)
       } getOrElse NotFound
     }
   })
@@ -643,10 +573,6 @@ trait RepositoryViewerControllerBase extends ControllerBase {
 
             html.files(revision, repository,
               if(path == ".") Nil else path.split("/").toList, // current path
-              context.loginAccount match {
-                case None => List()
-                case account: Option[Account] => getGroupsByUserName(account.get.userName)
-              }, // groups of current user
               new JGitUtil.CommitInfo(lastModifiedCommit), // last modified commit
               files, readme, hasWritePermission(repository.owner, repository.name, context.loginAccount),
               getPullRequestFromBranch(repository.owner, repository.name, revstr, repository.repository.defaultBranch),
@@ -759,8 +685,6 @@ trait RepositoryViewerControllerBase extends ControllerBase {
          .setTree(revCommit.getTree)
          .setOutputStream(response.getOutputStream)
          .call()
-
-      Unit
     }
   }
 

src/main/scala/gitbucket/core/controller/SearchController.scala

@@ -1,51 +0,0 @@
-package gitbucket.core.controller
-
-import gitbucket.core.search.html
-import gitbucket.core.service._
-import gitbucket.core.util.{StringUtil, ControlUtil, ReferrerAuthenticator, Implicits}
-import ControlUtil._
-import Implicits._
-import io.github.gitbucket.scalatra.forms._
-
-class SearchController extends SearchControllerBase
-  with RepositoryService with AccountService with ActivityService with RepositorySearchService with IssuesService with ReferrerAuthenticator
-
-trait SearchControllerBase extends ControllerBase { self: RepositoryService
-  with ActivityService with RepositorySearchService with ReferrerAuthenticator =>
-
-  val searchForm = mapping(
-    "query"      -> trim(text(required)),
-    "owner"      -> trim(text(required)),
-    "repository" -> trim(text(required))
-  )(SearchForm.apply)
-
-  case class SearchForm(query: String, owner: String, repository: String)
-
-  post("/search", searchForm){ form =>
-    redirect(s"/${form.owner}/${form.repository}/search?q=${StringUtil.urlEncode(form.query)}")
-  }
-
-  get("/:owner/:repository/search")(referrersOnly { repository =>
-    defining(params("q").trim, params.getOrElse("type", "code")){ case (query, target) =>
-      val page   = try {
-        val i = params.getOrElse("page", "1").toInt
-        if(i <= 0) 1 else i
-      } catch {
-        case e: NumberFormatException => 1
-      }
-
-      target.toLowerCase match {
-        case "issue" => html.issues(
-          searchIssues(repository.owner, repository.name, query),
-          countFiles(repository.owner, repository.name, query),
-          query, page, repository)
-
-        case _ => html.code(
-          searchFiles(repository.owner, repository.name, query),
-          countIssues(repository.owner, repository.name, query),
-          query, page, repository)
-      }
-    }
-  })
-
-}

src/main/scala/gitbucket/core/controller/SystemSettingsController.scala

@@ -1,17 +1,26 @@
 package gitbucket.core.controller
 
+import java.io.FileInputStream
+
 import gitbucket.core.admin.html
-import gitbucket.core.service.{AccountService, SystemSettingsService}
+import gitbucket.core.service.{AccountService, SystemSettingsService, RepositoryService}
 import gitbucket.core.util.AdminAuthenticator
 import gitbucket.core.ssh.SshServer
+import gitbucket.core.plugin.PluginRegistry
 import SystemSettingsService._
+import gitbucket.core.util.Implicits._
+import gitbucket.core.util.ControlUtil._
+import gitbucket.core.util.Directory._
+import gitbucket.core.util.StringUtil._
 import io.github.gitbucket.scalatra.forms._
+import org.apache.commons.io.{IOUtils, FileUtils}
+import org.scalatra.i18n.Messages
 
 class SystemSettingsController extends SystemSettingsControllerBase
-  with AccountService with AdminAuthenticator
+  with AccountService with RepositoryService with AdminAuthenticator
 
-trait SystemSettingsControllerBase extends ControllerBase {
-  self: AccountService with AdminAuthenticator =>
+trait SystemSettingsControllerBase extends AccountManagementControllerBase {
+  self: AccountService with RepositoryService with AdminAuthenticator =>
 
   private val form = mapping(
     "baseUrl"                  -> trim(label("Base URL", optional(text()))),
@@ -23,6 +32,7 @@ trait SystemSettingsControllerBase extends ControllerBase {
     "notification"             -> trim(label("Notification", boolean())),
     "activityLogLimit"         -> trim(label("Limit of activity logs", optional(number()))),
     "ssh"                      -> trim(label("SSH access", boolean())),
+    "sshHost"                  -> trim(label("SSH host", optional(text()))),
     "sshPort"                  -> trim(label("SSH port", optional(number()))),
     "useSMTP"                  -> trim(label("SMTP", boolean())),
     "smtp"                     -> optionalIfNotChecked("useSMTP", mapping(
@@ -50,9 +60,14 @@ trait SystemSettingsControllerBase extends ControllerBase {
         "keystore"                 -> trim(label("Keystore", optional(text())))
     )(Ldap.apply))
   )(SystemSettings.apply).verifying { settings =>
-    if(settings.ssh && settings.baseUrl.isEmpty){
-      Seq("baseUrl" -> "Base URL is required if SSH access is enabled.")
-    } else Nil
+    Vector(
+      if(settings.ssh && settings.baseUrl.isEmpty){
+        Some("baseUrl" -> "Base URL is required if SSH access is enabled.")
+      } else None,
+      if(settings.ssh && settings.sshHost.isEmpty){
+        Some("sshHost" -> "SSH host is required if SSH access is enabled.")
+      } else None
+    ).flatten
   }
 
   private val pluginForm = mapping(
@@ -61,6 +76,62 @@ trait SystemSettingsControllerBase extends ControllerBase {
 
   case class PluginForm(pluginIds: List[String])
 
+  case class DataExportForm(tableNames: List[String])
+
+  case class NewUserForm(userName: String, password: String, fullName: String,
+                         mailAddress: String, isAdmin: Boolean,
+                         url: Option[String], fileId: Option[String])
+
+  case class EditUserForm(userName: String, password: Option[String], fullName: String,
+                          mailAddress: String, isAdmin: Boolean, url: Option[String],
+                          fileId: Option[String], clearImage: Boolean, isRemoved: Boolean)
+
+  case class NewGroupForm(groupName: String, url: Option[String], fileId: Option[String],
+                          members: String)
+
+  case class EditGroupForm(groupName: String, url: Option[String], fileId: Option[String],
+                           members: String, clearImage: Boolean, isRemoved: Boolean)
+
+
+  val newUserForm = mapping(
+    "userName"    -> trim(label("Username"     ,text(required, maxlength(100), identifier, uniqueUserName))),
+    "password"    -> trim(label("Password"     ,text(required, maxlength(20)))),
+    "fullName"    -> trim(label("Full Name"    ,text(required, maxlength(100)))),
+    "mailAddress" -> trim(label("Mail Address" ,text(required, maxlength(100), uniqueMailAddress()))),
+    "isAdmin"     -> trim(label("User Type"    ,boolean())),
+    "url"         -> trim(label("URL"          ,optional(text(maxlength(200))))),
+    "fileId"      -> trim(label("File ID"      ,optional(text())))
+  )(NewUserForm.apply)
+
+  val editUserForm = mapping(
+    "userName"    -> trim(label("Username"     ,text(required, maxlength(100), identifier))),
+    "password"    -> trim(label("Password"     ,optional(text(maxlength(20))))),
+    "fullName"    -> trim(label("Full Name"    ,text(required, maxlength(100)))),
+    "mailAddress" -> trim(label("Mail Address" ,text(required, maxlength(100), uniqueMailAddress("userName")))),
+    "isAdmin"     -> trim(label("User Type"    ,boolean())),
+    "url"         -> trim(label("URL"          ,optional(text(maxlength(200))))),
+    "fileId"      -> trim(label("File ID"      ,optional(text()))),
+    "clearImage"  -> trim(label("Clear image"  ,boolean())),
+    "removed"     -> trim(label("Disable"      ,boolean(disableByNotYourself("userName"))))
+  )(EditUserForm.apply)
+
+  val newGroupForm = mapping(
+    "groupName" -> trim(label("Group name" ,text(required, maxlength(100), identifier, uniqueUserName))),
+    "url"       -> trim(label("URL"        ,optional(text(maxlength(200))))),
+    "fileId"    -> trim(label("File ID"    ,optional(text()))),
+    "members"   -> trim(label("Members"    ,text(required, members)))
+  )(NewGroupForm.apply)
+
+  val editGroupForm = mapping(
+    "groupName"  -> trim(label("Group name"  ,text(required, maxlength(100), identifier))),
+    "url"        -> trim(label("URL"         ,optional(text(maxlength(200))))),
+    "fileId"     -> trim(label("File ID"     ,optional(text()))),
+    "members"    -> trim(label("Members"     ,text(required, members))),
+    "clearImage" -> trim(label("Clear image" ,boolean())),
+    "removed"    -> trim(label("Disable"     ,boolean()))
+  )(EditGroupForm.apply)
+
+
   get("/admin/system")(adminOnly {
     html.system(flash.get("info"))
   })
@@ -68,20 +139,181 @@ trait SystemSettingsControllerBase extends ControllerBase {
   post("/admin/system", form)(adminOnly { form =>
     saveSystemSettings(form)
 
-    if(form.ssh && SshServer.isActive && context.settings.sshPort != form.sshPort){
-      SshServer.stop()
-    }
-
-    if(form.ssh && !SshServer.isActive && form.baseUrl.isDefined){
-      SshServer.start(
-        form.sshPort.getOrElse(SystemSettingsService.DefaultSshPort),
-        form.baseUrl.get)
-    } else if(!form.ssh && SshServer.isActive){
+    if (form.sshAddress != context.settings.sshAddress) {
       SshServer.stop()
+       for {
+         sshAddress <- form.sshAddress
+         baseUrl    <- form.baseUrl
+       }
+       SshServer.start(sshAddress, baseUrl)
     }
 
     flash += "info" -> "System settings has been updated."
     redirect("/admin/system")
   })
 
+  get("/admin/plugins")(adminOnly {
+    html.plugins(PluginRegistry().getPlugins())
+  })
+
+
+  get("/admin/users")(adminOnly {
+    val includeRemoved = params.get("includeRemoved").map(_.toBoolean).getOrElse(false)
+    val users          = getAllUsers(includeRemoved)
+    val members        = users.collect { case account if(account.isGroupAccount) =>
+      account.userName -> getGroupMembers(account.userName).map(_.userName)
+    }.toMap
+
+    html.userlist(users, members, includeRemoved)
+  })
+
+  get("/admin/users/_newuser")(adminOnly {
+    html.user(None)
+  })
+
+  post("/admin/users/_newuser", newUserForm)(adminOnly { form =>
+    createAccount(form.userName, sha1(form.password), form.fullName, form.mailAddress, form.isAdmin, form.url)
+    updateImage(form.userName, form.fileId, false)
+    redirect("/admin/users")
+  })
+
+  get("/admin/users/:userName/_edituser")(adminOnly {
+    val userName = params("userName")
+    html.user(getAccountByUserName(userName, true))
+  })
+
+  post("/admin/users/:name/_edituser", editUserForm)(adminOnly { form =>
+    val userName = params("userName")
+    getAccountByUserName(userName, true).map { account =>
+
+      if(form.isRemoved){
+        // Remove repositories
+        //        getRepositoryNamesOfUser(userName).foreach { repositoryName =>
+        //          deleteRepository(userName, repositoryName)
+        //          FileUtils.deleteDirectory(getRepositoryDir(userName, repositoryName))
+        //          FileUtils.deleteDirectory(getWikiRepositoryDir(userName, repositoryName))
+        //          FileUtils.deleteDirectory(getTemporaryDir(userName, repositoryName))
+        //        }
+        // Remove from GROUP_MEMBER, COLLABORATOR and REPOSITORY
+        removeUserRelatedData(userName)
+      }
+
+      updateAccount(account.copy(
+        password     = form.password.map(sha1).getOrElse(account.password),
+        fullName     = form.fullName,
+        mailAddress  = form.mailAddress,
+        isAdmin      = form.isAdmin,
+        url          = form.url,
+        isRemoved    = form.isRemoved))
+
+      updateImage(userName, form.fileId, form.clearImage)
+      redirect("/admin/users")
+
+    } getOrElse NotFound
+  })
+
+  get("/admin/users/_newgroup")(adminOnly {
+    html.usergroup(None, Nil)
+  })
+
+  post("/admin/users/_newgroup", newGroupForm)(adminOnly { form =>
+    createGroup(form.groupName, form.url)
+    updateGroupMembers(form.groupName, form.members.split(",").map {
+      _.split(":") match {
+        case Array(userName, isManager) => (userName, isManager.toBoolean)
+      }
+    }.toList)
+    updateImage(form.groupName, form.fileId, false)
+    redirect("/admin/users")
+  })
+
+  get("/admin/users/:groupName/_editgroup")(adminOnly {
+    defining(params("groupName")){ groupName =>
+      html.usergroup(getAccountByUserName(groupName, true), getGroupMembers(groupName))
+    }
+  })
+
+  post("/admin/users/:groupName/_editgroup", editGroupForm)(adminOnly { form =>
+    defining(params("groupName"), form.members.split(",").map {
+      _.split(":") match {
+        case Array(userName, isManager) => (userName, isManager.toBoolean)
+      }
+    }.toList){ case (groupName, members) =>
+      getAccountByUserName(groupName, true).map { account =>
+        updateGroup(groupName, form.url, form.isRemoved)
+
+        if(form.isRemoved){
+          // Remove from GROUP_MEMBER
+          updateGroupMembers(form.groupName, Nil)
+          // Remove repositories
+          getRepositoryNamesOfUser(form.groupName).foreach { repositoryName =>
+            deleteRepository(groupName, repositoryName)
+            FileUtils.deleteDirectory(getRepositoryDir(groupName, repositoryName))
+            FileUtils.deleteDirectory(getWikiRepositoryDir(groupName, repositoryName))
+            FileUtils.deleteDirectory(getTemporaryDir(groupName, repositoryName))
+          }
+        } else {
+          // Update GROUP_MEMBER
+          updateGroupMembers(form.groupName, members)
+          // Update COLLABORATOR for group repositories
+          getRepositoryNamesOfUser(form.groupName).foreach { repositoryName =>
+            removeCollaborators(form.groupName, repositoryName)
+            members.foreach { case (userName, isManager) =>
+              addCollaborator(form.groupName, repositoryName, userName)
+            }
+          }
+        }
+
+        updateImage(form.groupName, form.fileId, form.clearImage)
+        redirect("/admin/users")
+
+      } getOrElse NotFound
+    }
+  })
+
+  get("/admin/data")(adminOnly {
+    import gitbucket.core.util.JDBCUtil._
+    val session = request2Session(request)
+    html.data(session.conn.allTableNames())
+  })
+
+  post("/admin/export")(adminOnly {
+    import gitbucket.core.util.JDBCUtil._
+    val session = request2Session(request)
+    val file = if(params("type") == "sql"){
+      session.conn.exportAsSQL(request.getParameterValues("tableNames").toSeq)
+    } else {
+      session.conn.exportAsXML(request.getParameterValues("tableNames").toSeq)
+    }
+
+    contentType = "application/octet-stream"
+    response.setHeader("Content-Disposition", "attachment; filename=" + file.getName)
+    response.setContentLength(file.length.toInt)
+
+    using(new FileInputStream(file)){ in =>
+      IOUtils.copy(in, response.outputStream)
+    }
+
+    ()
+  })
+
+  private def members: Constraint = new Constraint(){
+    override def validate(name: String, value: String, messages: Messages): Option[String] = {
+      if(value.split(",").exists {
+        _.split(":") match { case Array(userName, isManager) => isManager.toBoolean }
+      }) None else Some("Must select one manager at least.")
+    }
+  }
+
+  protected def disableByNotYourself(paramName: String): Constraint = new Constraint() {
+    override def validate(name: String, value: String, messages: Messages): Option[String] = {
+      params.get(paramName).flatMap { userName =>
+        if(userName == context.loginAccount.get.userName && params.get("removed") == Some("true"))
+          Some("You can't disable your account yourself")
+        else
+          None
+      }
+    }
+  }
+
 }

src/main/scala/gitbucket/core/controller/UserManagementController.scala

@@ -1,204 +0,0 @@
-package gitbucket.core.controller
-
-import gitbucket.core.service.{RepositoryService, AccountService}
-import gitbucket.core.admin.users.html
-import gitbucket.core.util._
-import gitbucket.core.util.ControlUtil._
-import gitbucket.core.util.StringUtil._
-import gitbucket.core.util.Implicits._
-import gitbucket.core.util.Directory._
-import io.github.gitbucket.scalatra.forms._
-import org.scalatra.i18n.Messages
-import org.apache.commons.io.FileUtils
-
-class UserManagementController extends UserManagementControllerBase
-  with AccountService with RepositoryService with AdminAuthenticator
-
-trait UserManagementControllerBase extends AccountManagementControllerBase {
-  self: AccountService with RepositoryService with AdminAuthenticator =>
-  
-  case class NewUserForm(userName: String, password: String, fullName: String,
-                         mailAddress: String, isAdmin: Boolean,
-                         url: Option[String], fileId: Option[String])
-
-  case class EditUserForm(userName: String, password: Option[String], fullName: String,
-                          mailAddress: String, isAdmin: Boolean, url: Option[String],
-                          fileId: Option[String], clearImage: Boolean, isRemoved: Boolean)
-
-  case class NewGroupForm(groupName: String, url: Option[String], fileId: Option[String],
-                          members: String)
-
-  case class EditGroupForm(groupName: String, url: Option[String], fileId: Option[String],
-                           members: String, clearImage: Boolean, isRemoved: Boolean)
-
-  val newUserForm = mapping(
-    "userName"    -> trim(label("Username"     ,text(required, maxlength(100), identifier, uniqueUserName))),
-    "password"    -> trim(label("Password"     ,text(required, maxlength(20)))),
-    "fullName"    -> trim(label("Full Name"    ,text(required, maxlength(100)))),
-    "mailAddress" -> trim(label("Mail Address" ,text(required, maxlength(100), uniqueMailAddress()))),
-    "isAdmin"     -> trim(label("User Type"    ,boolean())),
-    "url"         -> trim(label("URL"          ,optional(text(maxlength(200))))),
-    "fileId"      -> trim(label("File ID"      ,optional(text())))
-  )(NewUserForm.apply)
-
-  val editUserForm = mapping(
-    "userName"    -> trim(label("Username"     ,text(required, maxlength(100), identifier))),
-    "password"    -> trim(label("Password"     ,optional(text(maxlength(20))))),
-    "fullName"    -> trim(label("Full Name"    ,text(required, maxlength(100)))),
-    "mailAddress" -> trim(label("Mail Address" ,text(required, maxlength(100), uniqueMailAddress("userName")))),
-    "isAdmin"     -> trim(label("User Type"    ,boolean())),
-    "url"         -> trim(label("URL"          ,optional(text(maxlength(200))))),
-    "fileId"      -> trim(label("File ID"      ,optional(text()))),
-    "clearImage"  -> trim(label("Clear image"  ,boolean())),
-    "removed"     -> trim(label("Disable"      ,boolean(disableByNotYourself("userName"))))
-  )(EditUserForm.apply)
-
-  val newGroupForm = mapping(
-    "groupName" -> trim(label("Group name" ,text(required, maxlength(100), identifier, uniqueUserName))),
-    "url"       -> trim(label("URL"        ,optional(text(maxlength(200))))),
-    "fileId"    -> trim(label("File ID"    ,optional(text()))),
-    "members"   -> trim(label("Members"    ,text(required, members)))
-  )(NewGroupForm.apply)
-
-  val editGroupForm = mapping(
-    "groupName"  -> trim(label("Group name"  ,text(required, maxlength(100), identifier))),
-    "url"        -> trim(label("URL"         ,optional(text(maxlength(200))))),
-    "fileId"     -> trim(label("File ID"     ,optional(text()))),
-    "members"    -> trim(label("Members"     ,text(required, members))),
-    "clearImage" -> trim(label("Clear image" ,boolean())),
-    "removed"    -> trim(label("Disable"     ,boolean()))
-  )(EditGroupForm.apply)
-
-  get("/admin/users")(adminOnly {
-    val includeRemoved = params.get("includeRemoved").map(_.toBoolean).getOrElse(false)
-    val users          = getAllUsers(includeRemoved)
-    val members        = users.collect { case account if(account.isGroupAccount) =>
-      account.userName -> getGroupMembers(account.userName).map(_.userName)
-    }.toMap
-
-    html.list(users, members, includeRemoved)
-  })
-  
-  get("/admin/users/_newuser")(adminOnly {
-    html.user(None)
-  })
-  
-  post("/admin/users/_newuser", newUserForm)(adminOnly { form =>
-    createAccount(form.userName, sha1(form.password), form.fullName, form.mailAddress, form.isAdmin, form.url)
-    updateImage(form.userName, form.fileId, false)
-    redirect("/admin/users")
-  })
-  
-  get("/admin/users/:userName/_edituser")(adminOnly {
-    val userName = params("userName")
-    html.user(getAccountByUserName(userName, true))
-  })
-  
-  post("/admin/users/:name/_edituser", editUserForm)(adminOnly { form =>
-    val userName = params("userName")
-    getAccountByUserName(userName, true).map { account =>
-
-      if(form.isRemoved){
-        // Remove repositories
-//        getRepositoryNamesOfUser(userName).foreach { repositoryName =>
-//          deleteRepository(userName, repositoryName)
-//          FileUtils.deleteDirectory(getRepositoryDir(userName, repositoryName))
-//          FileUtils.deleteDirectory(getWikiRepositoryDir(userName, repositoryName))
-//          FileUtils.deleteDirectory(getTemporaryDir(userName, repositoryName))
-//        }
-        // Remove from GROUP_MEMBER, COLLABORATOR and REPOSITORY
-        removeUserRelatedData(userName)
-      }
-
-      updateAccount(account.copy(
-        password     = form.password.map(sha1).getOrElse(account.password),
-        fullName     = form.fullName,
-        mailAddress  = form.mailAddress,
-        isAdmin      = form.isAdmin,
-        url          = form.url,
-        isRemoved    = form.isRemoved))
-
-      updateImage(userName, form.fileId, form.clearImage)
-      redirect("/admin/users")
-
-    } getOrElse NotFound
-  })
-
-  get("/admin/users/_newgroup")(adminOnly {
-    html.group(None, Nil)
-  })
-
-  post("/admin/users/_newgroup", newGroupForm)(adminOnly { form =>
-    createGroup(form.groupName, form.url)
-    updateGroupMembers(form.groupName, form.members.split(",").map {
-      _.split(":") match {
-        case Array(userName, isManager) => (userName, isManager.toBoolean)
-      }
-    }.toList)
-    updateImage(form.groupName, form.fileId, false)
-    redirect("/admin/users")
-  })
-
-  get("/admin/users/:groupName/_editgroup")(adminOnly {
-    defining(params("groupName")){ groupName =>
-      html.group(getAccountByUserName(groupName, true), getGroupMembers(groupName))
-    }
-  })
-
-  post("/admin/users/:groupName/_editgroup", editGroupForm)(adminOnly { form =>
-    defining(params("groupName"), form.members.split(",").map {
-      _.split(":") match {
-        case Array(userName, isManager) => (userName, isManager.toBoolean)
-      }
-    }.toList){ case (groupName, members) =>
-      getAccountByUserName(groupName, true).map { account =>
-        updateGroup(groupName, form.url, form.isRemoved)
-
-        if(form.isRemoved){
-          // Remove from GROUP_MEMBER
-          updateGroupMembers(form.groupName, Nil)
-          // Remove repositories
-          getRepositoryNamesOfUser(form.groupName).foreach { repositoryName =>
-            deleteRepository(groupName, repositoryName)
-            FileUtils.deleteDirectory(getRepositoryDir(groupName, repositoryName))
-            FileUtils.deleteDirectory(getWikiRepositoryDir(groupName, repositoryName))
-            FileUtils.deleteDirectory(getTemporaryDir(groupName, repositoryName))
-          }
-        } else {
-          // Update GROUP_MEMBER
-          updateGroupMembers(form.groupName, members)
-          // Update COLLABORATOR for group repositories
-          getRepositoryNamesOfUser(form.groupName).foreach { repositoryName =>
-            removeCollaborators(form.groupName, repositoryName)
-            members.foreach { case (userName, isManager) =>
-              addCollaborator(form.groupName, repositoryName, userName)
-            }
-          }
-        }
-
-        updateImage(form.groupName, form.fileId, form.clearImage)
-        redirect("/admin/users")
-
-      } getOrElse NotFound
-    }
-  })
-
-  private def members: Constraint = new Constraint(){
-    override def validate(name: String, value: String, messages: Messages): Option[String] = {
-      if(value.split(",").exists {
-        _.split(":") match { case Array(userName, isManager) => isManager.toBoolean }
-      }) None else Some("Must select one manager at least.")
-    }
-  }
-
-  protected def disableByNotYourself(paramName: String): Constraint = new Constraint() {
-    override def validate(name: String, value: String, messages: Messages): Option[String] = {
-      params.get(paramName).flatMap { userName =>
-        if(userName == context.loginAccount.get.userName && params.get("removed") == Some("true"))
-          Some("You can't disable your account yourself")
-        else
-          None
-      }
-    }
-  }
-}

src/main/scala/gitbucket/core/controller/WikiController.scala

@@ -12,7 +12,8 @@ import org.eclipse.jgit.api.Git
 import org.scalatra.i18n.Messages
 
 class WikiController extends WikiControllerBase 
-  with WikiService with RepositoryService with AccountService with ActivityService with CollaboratorsAuthenticator with ReferrerAuthenticator
+  with WikiService with RepositoryService with AccountService with ActivityService
+  with CollaboratorsAuthenticator with ReferrerAuthenticator
 
 trait WikiControllerBase extends ControllerBase {
   self: WikiService with RepositoryService with ActivityService with CollaboratorsAuthenticator with ReferrerAuthenticator =>

src/main/scala/gitbucket/core/model/BasicTemplate.scala

@@ -35,7 +35,7 @@ protected[model] trait TemplateComponent { self: Profile =>
       byRepository(userName, repositoryName) && (this.labelId === labelId)
 
     def byLabel(owner: String, repository: String, labelName: String) =
-      byRepository(userName, repositoryName) && (this.labelName === labelName.bind)
+      byRepository(owner, repository) && (this.labelName === labelName.bind)
   }
 
   trait MilestoneTemplate extends BasicTemplate { self: Table[_] =>

src/main/scala/gitbucket/core/model/Plugin.scala

@@ -1,19 +0,0 @@
-package gitbucket.core.model
-
-trait PluginComponent extends TemplateComponent { self: Profile =>
-  import profile.simple._
-  import self._
-
-  lazy val Plugins = TableQuery[Plugins]
-
-  class Plugins(tag: Tag) extends Table[Plugin](tag, "PLUGIN"){
-    val pluginId = column[String]("PLUGIN_ID", O PrimaryKey)
-    val version = column[String]("VERSION")
-    def * = (pluginId, version) <> (Plugin.tupled, Plugin.unapply)
-  }
-}
-
-case class Plugin(
-  pluginId: String,
-  version: String
-)

src/main/scala/gitbucket/core/model/Profile.scala

@@ -1,5 +1,6 @@
 package gitbucket.core.model
 
+import gitbucket.core.util.DatabaseConfig
 
 trait Profile {
   val profile: slick.driver.JdbcProfile
@@ -28,7 +29,9 @@ trait Profile {
 }
 
 trait ProfileProvider { self: Profile =>
-  val profile = slick.driver.H2Driver
+
+  lazy val profile = DatabaseConfig.slickDriver
+
 }
 
 trait CoreProfile extends ProfileProvider with Profile
@@ -49,7 +52,6 @@ trait CoreProfile extends ProfileProvider with Profile
   with SshKeyComponent
   with WebHookComponent
   with WebHookEventComponent
-  with PluginComponent
   with ProtectedBranchComponent
 
 object Profile extends CoreProfile

src/main/scala/gitbucket/core/model/WebHook.scala

@@ -3,20 +3,43 @@ package gitbucket.core.model
 trait WebHookComponent extends TemplateComponent { self: Profile =>
   import profile.simple._
 
+  implicit val whContentTypeColumnType = MappedColumnType.base[WebHookContentType, String](whct => whct.code , code => WebHookContentType.valueOf(code))
+  
   lazy val WebHooks = TableQuery[WebHooks]
 
   class WebHooks(tag: Tag) extends Table[WebHook](tag, "WEB_HOOK") with BasicTemplate {
     val url = column[String]("URL")
-    def * = (userName, repositoryName, url) <> ((WebHook.apply _).tupled, WebHook.unapply)
+    val token = column[Option[String]]("TOKEN", O.Nullable)
+    val ctype = column[WebHookContentType]("CTYPE", O.NotNull)
+    def * = (userName, repositoryName, url, ctype, token) <> ((WebHook.apply _).tupled, WebHook.unapply)
 
     def byPrimaryKey(owner: String, repository: String, url: String) = byRepository(owner, repository) && (this.url === url.bind)
   }
 }
 
+case class WebHookContentType(val code: String, val ctype: String)
+
+object WebHookContentType {
+  object JSON extends WebHookContentType("json", "application/json")
+
+  object FORM extends WebHookContentType("form", "application/x-www-form-urlencoded")
+
+  val values: Vector[WebHookContentType] = Vector(JSON, FORM)
+
+  private val map: Map[String, WebHookContentType] = values.map(enum => enum.code -> enum).toMap
+
+  def apply(code: String): WebHookContentType = map(code)
+
+  def valueOf(code: String): WebHookContentType = map(code)
+  def valueOpt(code: String): Option[WebHookContentType] = map.get(code)
+}
+
 case class WebHook(
   userName: String,
   repositoryName: String,
-  url: String
+  url: String,
+  ctype: WebHookContentType,
+  token: Option[String]
 )
 
 object WebHook {

src/main/scala/gitbucket/core/plugin/Plugin.scala

@@ -1,16 +1,18 @@
 package gitbucket.core.plugin
 
 import javax.servlet.ServletContext
-import gitbucket.core.controller.ControllerBase
+import gitbucket.core.controller.{Context, ControllerBase}
+import gitbucket.core.model.Account
+import gitbucket.core.service.RepositoryService.RepositoryInfo
 import gitbucket.core.service.SystemSettingsService.SystemSettings
 import gitbucket.core.util.ControlUtil._
-import gitbucket.core.util.Version
+import io.github.gitbucket.solidbase.model.Version
 
 /**
  * Trait for define plugin interface.
- * To provide plugin, put Plugin class which mixed in this trait into the package root.
+ * To provide a plugin, put a Plugin class which extends this class into the package root.
  */
-trait Plugin {
+abstract class Plugin {
 
   val pluginId: String
   val pluginName: String
@@ -77,6 +79,76 @@ trait Plugin {
    */
   def receiveHooks(registry: PluginRegistry, context: ServletContext, settings: SystemSettings): Seq[ReceiveHook] = Nil
 
+  /**
+   * Override to add global menus.
+   */
+  val globalMenus: Seq[(Context) => Option[Link]] = Nil
+
+  /**
+   * Override to add global menus.
+   */
+  def globalMenus(registry: PluginRegistry, context: ServletContext, settings: SystemSettings): Seq[(Context) => Option[Link]] = Nil
+
+  /**
+   * Override to add repository menus.
+   */
+  val repositoryMenus: Seq[(RepositoryInfo, Context) => Option[Link]] = Nil
+
+  /**
+   * Override to add repository menus.
+   */
+  def repositoryMenus(registry: PluginRegistry, context: ServletContext, settings: SystemSettings): Seq[(RepositoryInfo, Context) => Option[Link]] = Nil
+
+  /**
+   * Override to add repository setting tabs.
+   */
+  val repositorySettingTabs: Seq[(RepositoryInfo, Context) => Option[Link]] = Nil
+
+  /**
+   * Override to add repository setting tabs.
+   */
+  def repositorySettingTabs(registry: PluginRegistry, context: ServletContext, settings: SystemSettings): Seq[(RepositoryInfo, Context) => Option[Link]] = Nil
+
+  /**
+   * Override to add profile tabs.
+   */
+  val profileTabs: Seq[(Account, Context) => Option[Link]] = Nil
+
+  /**
+   * Override to add profile tabs.
+   */
+  def profileTabs(registry: PluginRegistry, context: ServletContext, settings: SystemSettings): Seq[(Account, Context) => Option[Link]] = Nil
+
+  /**
+   * Override to add system setting menus.
+   */
+  val systemSettingMenus: Seq[(Context) => Option[Link]] = Nil
+
+  /**
+   * Override to add system setting menus.
+   */
+  def systemSettingMenus(registry: PluginRegistry, context: ServletContext, settings: SystemSettings): Seq[(Context) => Option[Link]] = Nil
+
+  /**
+   * Override to add account setting menus.
+   */
+  val accountSettingMenus: Seq[(Context) => Option[Link]] = Nil
+
+  /**
+   * Override to add account setting menus.
+   */
+  def accountSettingMenus(registry: PluginRegistry, context: ServletContext, settings: SystemSettings): Seq[(Context) => Option[Link]] = Nil
+
+  /**
+   * Override to add dashboard tabs.
+   */
+  val dashboardTabs: Seq[(Context) => Option[Link]] = Nil
+
+  /**
+   * Override to add dashboard tabs.
+   */
+  def dashboardTabs(registry: PluginRegistry, context: ServletContext, settings: SystemSettings): Seq[(Context) => Option[Link]] = Nil
+
   /**
    * This method is invoked in initialization of plugin system.
    * Register plugin functionality to PluginRegistry.
@@ -100,6 +172,27 @@ trait Plugin {
     (receiveHooks ++ receiveHooks(registry, context, settings)).foreach { receiveHook =>
       registry.addReceiveHook(receiveHook)
     }
+    (globalMenus ++ globalMenus(registry, context, settings)).foreach { globalMenu =>
+      registry.addGlobalMenu(globalMenu)
+    }
+    (repositoryMenus ++ repositoryMenus(registry, context, settings)).foreach { repositoryMenu =>
+      registry.addRepositoryMenu(repositoryMenu)
+    }
+    (repositorySettingTabs ++ repositorySettingTabs(registry, context, settings)).foreach { repositorySettingTab =>
+      registry.addRepositorySettingTab(repositorySettingTab)
+    }
+    (profileTabs ++ profileTabs(registry, context, settings)).foreach { profileTab =>
+      registry.addProfileTab(profileTab)
+    }
+    (systemSettingMenus ++ systemSettingMenus(registry, context, settings)).foreach { systemSettingMenu =>
+      registry.addSystemSettingMenu(systemSettingMenu)
+    }
+    (accountSettingMenus ++ accountSettingMenus(registry, context, settings)).foreach { accountSettingMenu =>
+      registry.addAccountSettingMenu(accountSettingMenu)
+    }
+    (dashboardTabs ++ dashboardTabs(registry, context, settings)).foreach { dashboardTab =>
+      registry.addDashboardTab(dashboardTab)
+    }
   }
 
   /**

src/main/scala/gitbucket/core/plugin/PluginRegistory.scala

@@ -3,16 +3,18 @@ package gitbucket.core.plugin
 import java.io.{File, FilenameFilter, InputStream}
 import java.net.URLClassLoader
 import javax.servlet.ServletContext
-import javax.servlet.http.{HttpServletRequest, HttpServletResponse}
 
 import gitbucket.core.controller.{Context, ControllerBase}
+import gitbucket.core.model.Account
 import gitbucket.core.service.ProtectedBranchService.ProtectedBranchReceiveHook
 import gitbucket.core.service.RepositoryService.RepositoryInfo
 import gitbucket.core.service.SystemSettingsService.SystemSettings
 import gitbucket.core.util.ControlUtil._
+import gitbucket.core.util.DatabaseConfig
 import gitbucket.core.util.Directory._
-import gitbucket.core.util.JDBCUtil._
-import gitbucket.core.util.{Version, Versions}
+import io.github.gitbucket.solidbase.Solidbase
+import io.github.gitbucket.solidbase.model.Module
+import liquibase.database.core.H2Database
 import org.apache.commons.codec.binary.{Base64, StringUtils}
 import org.slf4j.LoggerFactory
 
@@ -33,6 +35,14 @@ class PluginRegistry {
   private val receiveHooks = new ListBuffer[ReceiveHook]
   receiveHooks += new ProtectedBranchReceiveHook()
 
+  private val globalMenus = new ListBuffer[(Context) => Option[Link]]
+  private val repositoryMenus = new ListBuffer[(RepositoryInfo, Context) => Option[Link]]
+  private val repositorySettingTabs = new ListBuffer[(RepositoryInfo, Context) => Option[Link]]
+  private val profileTabs = new ListBuffer[(Account, Context) => Option[Link]]
+  private val systemSettingMenus = new ListBuffer[(Context) => Option[Link]]
+  private val accountSettingMenus = new ListBuffer[(Context) => Option[Link]]
+  private val dashboardTabs = new ListBuffer[(Context) => Option[Link]]
+
   def addPlugin(pluginInfo: PluginInfo): Unit = {
     plugins += pluginInfo
   }
@@ -107,17 +117,47 @@ class PluginRegistry {
 
   def getReceiveHooks: Seq[ReceiveHook] = receiveHooks.toSeq
 
-  private case class GlobalAction(
-    method: String,
-    path: String,
-    function: (HttpServletRequest, HttpServletResponse, Context) => Any
-  )
+  def addGlobalMenu(globalMenu: (Context) => Option[Link]): Unit = {
+    globalMenus += globalMenu
+  }
 
-  private case class RepositoryAction(
-    method: String,
-    path: String,
-    function: (HttpServletRequest, HttpServletResponse, Context, RepositoryInfo) => Any
-  )
+  def getGlobalMenus: Seq[(Context) => Option[Link]] = globalMenus.toSeq
+
+  def addRepositoryMenu(repositoryMenu: (RepositoryInfo, Context) => Option[Link]): Unit = {
+    repositoryMenus += repositoryMenu
+  }
+
+  def getRepositoryMenus: Seq[(RepositoryInfo, Context) => Option[Link]] = repositoryMenus.toSeq
+
+  def addRepositorySettingTab(repositorySettingTab: (RepositoryInfo, Context) => Option[Link]): Unit = {
+    repositorySettingTabs += repositorySettingTab
+  }
+
+  def getRepositorySettingTabs: Seq[(RepositoryInfo, Context) => Option[Link]] = repositorySettingTabs.toSeq
+
+  def addProfileTab(profileTab: (Account, Context) => Option[Link]): Unit = {
+    profileTabs += profileTab
+  }
+
+  def getProfileTabs: Seq[(Account, Context) => Option[Link]] = profileTabs.toSeq
+
+  def addSystemSettingMenu(systemSettingMenu: (Context) => Option[Link]): Unit = {
+    systemSettingMenus += systemSettingMenu
+  }
+
+  def getSystemSettingMenus: Seq[(Context) => Option[Link]] = systemSettingMenus.toSeq
+
+  def addAccountSettingMenu(accountSettingMenu: (Context) => Option[Link]): Unit = {
+    accountSettingMenus += accountSettingMenu
+  }
+
+  def getAccountSettingMenus: Seq[(Context) => Option[Link]] = accountSettingMenus.toSeq
+
+  def addDashboardTab(dashboardTab: (Context) => Option[Link]): Unit = {
+    dashboardTabs += dashboardTab
+  }
+
+  def getDashboardTabs: Seq[(Context) => Option[Link]] = dashboardTabs.toSeq
 
 }
 
@@ -149,30 +189,15 @@ object PluginRegistry {
           val plugin = classLoader.loadClass("Plugin").newInstance().asInstanceOf[Plugin]
 
           // Migration
-          val headVersion = plugin.versions.head
-          val currentVersion = conn.find("SELECT * FROM PLUGIN WHERE PLUGIN_ID = ?", plugin.pluginId)(_.getString("VERSION")) match {
-            case Some(x) => {
-              val dim = x.split("\\.")
-              Version(dim(0).toInt, dim(1).toInt)
-            }
-            case None => Version(0, 0)
-          }
-
-          Versions.update(conn, headVersion, currentVersion, plugin.versions, new URLClassLoader(Array(pluginJar.toURI.toURL))){ conn =>
-            currentVersion.versionString match {
-              case "0.0" =>
-                conn.update("INSERT INTO PLUGIN (PLUGIN_ID, VERSION) VALUES (?, ?)", plugin.pluginId, headVersion.versionString)
-              case _ =>
-                conn.update("UPDATE PLUGIN SET VERSION = ? WHERE PLUGIN_ID = ?", headVersion.versionString, plugin.pluginId)
-            }
-          }
+          val solidbase = new Solidbase()
+          solidbase.migrate(conn, classLoader, DatabaseConfig.liquiDriver, new Module(plugin.pluginId, plugin.versions: _*))
 
           // Initialize
           plugin.initialize(instance, context, settings)
           instance.addPlugin(PluginInfo(
             pluginId    = plugin.pluginId,
             pluginName  = plugin.pluginName,
-            version     = plugin.versions.head.versionString,
+            version     = plugin.versions.head.getVersion,
             description = plugin.description,
             pluginClass = plugin
           ))
@@ -201,6 +226,8 @@ object PluginRegistry {
 
 }
 
+case class Link(id: String, label: String, path: String, icon: Option[String] = None)
+
 case class PluginInfo(
   pluginId: String,
   pluginName: String,

src/main/scala/gitbucket/core/service/HandleCommentService.scala

@@ -0,0 +1,91 @@
+package gitbucket.core.service
+
+import gitbucket.core.controller.Context
+import gitbucket.core.model.Issue
+import gitbucket.core.model.Profile._
+import gitbucket.core.util.ControlUtil._
+import gitbucket.core.util.Implicits._
+import gitbucket.core.util.Notifier
+import profile.simple._
+
+trait HandleCommentService {
+  self: RepositoryService with IssuesService with ActivityService
+    with WebHookService with WebHookIssueCommentService with WebHookPullRequestService =>
+
+  /**
+   * @see [[https://github.com/takezoe/gitbucket/wiki/CommentAction]]
+   */
+  def handleComment(issue: Issue, content: Option[String], repository: RepositoryService.RepositoryInfo, actionOpt: Option[String])
+                   (implicit context: Context, s: Session) = {
+
+    defining(repository.owner, repository.name){ case (owner, name) =>
+      val userName = context.loginAccount.get.userName
+
+      val (action, recordActivity) = actionOpt
+        .collect {
+          case "close" if(!issue.closed) => true  ->
+            (Some("close")  -> Some(if(issue.isPullRequest) recordClosePullRequestActivity _ else recordCloseIssueActivity _))
+          case "reopen" if(issue.closed) => false ->
+            (Some("reopen") -> Some(recordReopenIssueActivity _))
+        }
+        .map { case (closed, t) =>
+          updateClosed(owner, name, issue.issueId, closed)
+          t
+        }
+        .getOrElse(None -> None)
+
+      val commentId = (content, action) match {
+        case (None, None) => None
+        case (None, Some(action)) => Some(createComment(owner, name, userName, issue.issueId, action.capitalize, action))
+        case (Some(content), _) => Some(createComment(owner, name, userName, issue.issueId, content, action.map(_+ "_comment").getOrElse("comment")))
+      }
+
+      // record comment activity if comment is entered
+      content foreach {
+        (if(issue.isPullRequest) recordCommentPullRequestActivity _ else recordCommentIssueActivity _)
+        (owner, name, userName, issue.issueId, _)
+      }
+      recordActivity foreach ( _ (owner, name, userName, issue.issueId, issue.title) )
+
+      // extract references and create refer comment
+      content.map { content =>
+        createReferComment(owner, name, issue, content, context.loginAccount.get)
+      }
+
+      // call web hooks
+      action match {
+        case None => commentId.map{ commentIdSome => callIssueCommentWebHook(repository, issue, commentIdSome, context.loginAccount.get) }
+        case Some(act) => val webHookAction = act match {
+          case "open"   => "opened"
+          case "reopen" => "reopened"
+          case "close"  => "closed"
+          case _ => act
+        }
+          if(issue.isPullRequest){
+            callPullRequestWebHook(webHookAction, repository, issue.issueId, context.baseUrl, context.loginAccount.get)
+          } else {
+            callIssuesWebHook(webHookAction, repository, issue, context.baseUrl, context.loginAccount.get)
+          }
+      }
+
+      // notifications
+      Notifier() match {
+        case f =>
+          content foreach {
+            f.toNotify(repository, issue, _){
+              Notifier.msgComment(s"${context.baseUrl}/${owner}/${name}/${
+                if(issue.isPullRequest) "pull" else "issues"}/${issue.issueId}#comment-${commentId.get}")
+            }
+          }
+          action foreach {
+            f.toNotify(repository, issue, _){
+              Notifier.msgStatus(s"${context.baseUrl}/${owner}/${name}/issues/${issue.issueId}")
+            }
+          }
+      }
+
+      commentId.map( issue -> _ )
+    }
+  }
+
+}

src/main/scala/gitbucket/core/service/IssuesService.scala

@@ -1,6 +1,8 @@
 package gitbucket.core.service
 
 import gitbucket.core.model.Profile._
+import gitbucket.core.util.JGitUtil.CommitInfo
+import gitbucket.core.util.StringUtil
 import profile.simple._
 
 import gitbucket.core.util.StringUtil._
@@ -12,6 +14,7 @@ import Q.interpolation
 
 
 trait IssuesService {
+  self: AccountService =>
   import IssuesService._
 
   def getIssue(owner: String, repository: String, issueId: String)(implicit s: Session) =
@@ -105,25 +108,41 @@ trait IssuesService {
       }
       import gitbucket.core.model.Profile.commitStateColumnType
       val query = Q.query[Seq[(String, String, Int)], (String, String, Int, Int, Int, Option[String], Option[CommitState], Option[String], Option[String])](s"""
-        SELECT SUMM.USER_NAME, SUMM.REPOSITORY_NAME, SUMM.ISSUE_ID, CS_ALL, CS_SUCCESS
-             , CSD.CONTEXT, CSD.STATE, CSD.TARGET_URL, CSD.DESCRIPTION
-        FROM (SELECT
-           PR.USER_NAME
-         , PR.REPOSITORY_NAME
-         , PR.ISSUE_ID
-         , COUNT(CS.STATE) AS CS_ALL
-         , SUM(CS.STATE='success') AS CS_SUCCESS
-         , PR.COMMIT_ID_TO AS COMMIT_ID
+        SELECT
+          SUMM.USER_NAME,
+          SUMM.REPOSITORY_NAME,
+          SUMM.ISSUE_ID,
+          CS_ALL,
+          CS_SUCCESS,
+          CSD.CONTEXT,
+          CSD.STATE,
+          CSD.TARGET_URL,
+          CSD.DESCRIPTION
+        FROM (
+          SELECT
+            PR.USER_NAME,
+            PR.REPOSITORY_NAME,
+            PR.ISSUE_ID,
+            COUNT(CS.STATE) AS CS_ALL,
+            CSS.CS_SUCCESS  AS CS_SUCCESS,
+            PR.COMMIT_ID_TO AS COMMIT_ID
           FROM PULL_REQUEST PR
           JOIN COMMIT_STATUS CS
-            ON PR.USER_NAME=CS.USER_NAME
-           AND PR.REPOSITORY_NAME=CS.REPOSITORY_NAME
-           AND PR.COMMIT_ID_TO=CS.COMMIT_ID
-         WHERE $issueIdQuery
-         GROUP BY PR.USER_NAME, PR.REPOSITORY_NAME, PR.ISSUE_ID) as SUMM
+            ON PR.USER_NAME = CS.USER_NAME AND PR.REPOSITORY_NAME = CS.REPOSITORY_NAME AND PR.COMMIT_ID_TO = CS.COMMIT_ID
+          JOIN (
+            SELECT
+              COUNT(*) AS CS_SUCCESS,
+              USER_NAME,
+              REPOSITORY_NAME,
+              COMMIT_ID
+            FROM COMMIT_STATUS WHERE STATE = 'success' GROUP BY USER_NAME, REPOSITORY_NAME, COMMIT_ID
+          ) CSS ON PR.USER_NAME = CSS.USER_NAME AND PR.REPOSITORY_NAME = CSS.REPOSITORY_NAME AND PR.COMMIT_ID_TO = CSS.COMMIT_ID
+          WHERE $issueIdQuery
+          GROUP BY PR.USER_NAME, PR.REPOSITORY_NAME, PR.ISSUE_ID, CSS.CS_SUCCESS
+        ) as SUMM
         LEFT OUTER JOIN COMMIT_STATUS CSD
           ON SUMM.CS_ALL = 1 AND SUMM.COMMIT_ID = CSD.COMMIT_ID""");
-      query(issueList).list.map{
+      query(issueList).list.map {
         case(userName, repositoryName, issueId, count, successCount, context, state, targetUrl, description) =>
           (userName, repositoryName, issueId) -> CommitStatusInfo(count, successCount, context, state, targetUrl, description)
         }.toMap
@@ -394,12 +413,35 @@ trait IssuesService {
       }
     }
   }
+
+  def createReferComment(owner: String, repository: String, fromIssue: Issue, message: String, loginAccount: Account)(implicit s: Session) = {
+    StringUtil.extractIssueId(message).foreach { issueId =>
+      val content = fromIssue.issueId + ":" + fromIssue.title
+      if(getIssue(owner, repository, issueId).isDefined){
+        // Not add if refer comment already exist.
+        if(!getComments(owner, repository, issueId.toInt).exists { x => x.action == "refer" && x.content == content }) {
+          createComment(owner, repository, loginAccount.userName, issueId.toInt, content, "refer")
+        }
+      }
+    }
+  }
+
+  def createIssueComment(owner: String, repository: String, commit: CommitInfo)(implicit s: Session) = {
+    StringUtil.extractIssueId(commit.fullMessage).foreach { issueId =>
+      if(getIssue(owner, repository, issueId).isDefined){
+        getAccountByMailAddress(commit.committerEmailAddress).foreach { account =>
+          createComment(owner, repository, account.userName, issueId.toInt, commit.fullMessage + " " + commit.id, "commit")
+        }
+      }
+    }
+  }
+
 }
 
 object IssuesService {
   import javax.servlet.http.HttpServletRequest
 
-  val IssueLimit = 30
+  val IssueLimit = 25
 
   case class IssueSearchCondition(
       labels: Set[String] = Set.empty,

src/main/scala/gitbucket/core/service/PluginService.scala

@@ -1,24 +0,0 @@
-package gitbucket.core.service
-
-import gitbucket.core.model.Plugin
-import gitbucket.core.model.Profile._
-import profile.simple._
-
-trait PluginService {
-
-  def getPlugins()(implicit s: Session): List[Plugin] =
-    Plugins.sortBy(_.pluginId).list
-
-  def registerPlugin(plugin: Plugin)(implicit s: Session): Unit =
-    Plugins.insert(plugin)
-
-  def updatePlugin(plugin: Plugin)(implicit s: Session): Unit =
-    Plugins.filter(_.pluginId === plugin.pluginId.bind).map(_.version).update(plugin.version)
-
-  def deletePlugin(pluginId: String)(implicit s: Session): Unit =
-    Plugins.filter(_.pluginId === pluginId.bind).delete
-
-  def getPlugin(pluginId: String)(implicit s: Session): Option[Plugin] =
-    Plugins.filter(_.pluginId === pluginId.bind).firstOption
-
-}

src/main/scala/gitbucket/core/service/RepositoryCreationService.scala

@@ -0,0 +1,79 @@
+package gitbucket.core.service
+
+import gitbucket.core.model.Profile._
+import gitbucket.core.util.ControlUtil._
+import gitbucket.core.util.Directory._
+import gitbucket.core.util.JGitUtil
+import gitbucket.core.model.Account
+import org.eclipse.jgit.api.Git
+import org.eclipse.jgit.dircache.DirCache
+import org.eclipse.jgit.lib.{FileMode, Constants}
+import profile.simple._
+
+trait RepositoryCreationService {
+  self: AccountService with RepositoryService with LabelsService with WikiService with ActivityService =>
+
+  def createRepository(loginAccount: Account, owner: String, name: String, description: Option[String], isPrivate: Boolean, createReadme: Boolean)
+                      (implicit s: Session) {
+    val ownerAccount  = getAccountByUserName(owner).get
+    val loginUserName = loginAccount.userName
+
+    // Insert to the database at first
+    insertRepository(name, owner, description, isPrivate)
+
+    // Add collaborators for group repository
+    if(ownerAccount.isGroupAccount){
+      getGroupMembers(owner).foreach { member =>
+        addCollaborator(owner, name, member.userName)
+      }
+    }
+
+    // Insert default labels
+    insertDefaultLabels(owner, name)
+
+    // Create the actual repository
+    val gitdir = getRepositoryDir(owner, name)
+    JGitUtil.initRepository(gitdir)
+
+    if(createReadme){
+      using(Git.open(gitdir)){ git =>
+        val builder  = DirCache.newInCore.builder()
+        val inserter = git.getRepository.newObjectInserter()
+        val headId   = git.getRepository.resolve(Constants.HEAD + "^{commit}")
+        val content  = if(description.nonEmpty){
+          name + "\n" +
+            "===============\n" +
+            "\n" +
+            description.get
+        } else {
+          name + "\n" +
+            "===============\n"
+        }
+
+        builder.add(JGitUtil.createDirCacheEntry("README.md", FileMode.REGULAR_FILE,
+          inserter.insert(Constants.OBJ_BLOB, content.getBytes("UTF-8"))))
+        builder.finish()
+
+        JGitUtil.createNewCommit(git, inserter, headId, builder.getDirCache.writeTree(inserter),
+          Constants.HEAD, loginAccount.fullName, loginAccount.mailAddress, "Initial commit")
+      }
+    }
+
+    // Create Wiki repository
+    createWikiRepository(loginAccount, owner, name)
+
+    // Record activity
+    recordCreateRepositoryActivity(owner, name, loginUserName)
+  }
+
+  def insertDefaultLabels(userName: String, repositoryName: String)(implicit s: Session): Unit = {
+    createLabel(userName, repositoryName, "bug", "fc2929")
+    createLabel(userName, repositoryName, "duplicate", "cccccc")
+    createLabel(userName, repositoryName, "enhancement", "84b6eb")
+    createLabel(userName, repositoryName, "invalid", "e6e6e6")
+    createLabel(userName, repositoryName, "question", "cc317c")
+    createLabel(userName, repositoryName, "wontfix", "ffffff")
+  }
+
+
+}

src/main/scala/gitbucket/core/service/RepositorySearchService.scala

@@ -53,7 +53,30 @@ trait RepositorySearchService { self: IssuesService =>
       }
     }
 
-  private def searchRepositoryFiles(git: Git, query: String): List[(String, String)] = {
+  def countWikiPages(owner: String, repository: String, query: String): Int =
+    using(Git.open(Directory.getWikiRepositoryDir(owner, repository))){ git =>
+      if(JGitUtil.isEmpty(git)) 0 else searchRepositoryFiles(git, query).length
+    }
+
+  def searchWikiPages(owner: String, repository: String, query: String): List[FileSearchResult] =
+    using(Git.open(Directory.getWikiRepositoryDir(owner, repository))){ git =>
+      if(JGitUtil.isEmpty(git)){
+        Nil
+      } else {
+        val files = searchRepositoryFiles(git, query)
+        val commits = JGitUtil.getLatestCommitFromPaths(git, files.map(_._1), "HEAD")
+        files.map { case (path, text) =>
+          val (highlightText, lineNumber) = getHighlightText(text, query)
+          FileSearchResult(
+            path.replaceFirst("\\.md$", ""),
+            commits(path).getCommitterIdent.getWhen,
+            highlightText,
+            lineNumber)
+        }
+      }
+    }
+
+  def searchRepositoryFiles(git: Git, query: String): List[(String, String)] = {
     val revWalk   = new RevWalk(git.getRepository)
     val objectId  = git.getRepository.resolve("HEAD")
     val revCommit = revWalk.parseCommit(objectId)

src/main/scala/gitbucket/core/service/RepositoryService.scala

@@ -1,5 +1,6 @@
 package gitbucket.core.service
 
+import gitbucket.core.controller.Context
 import gitbucket.core.model.{Collaborator, Repository, Account}
 import gitbucket.core.model.Profile._
 import gitbucket.core.util.JGitUtil
@@ -18,7 +19,7 @@ trait RepositoryService { self: AccountService =>
    * @param originRepositoryName specify for the forked repository. (default is None)
    * @param originUserName specify for the forked repository. (default is None)
    */
-  def createRepository(repositoryName: String, userName: String, description: Option[String], isPrivate: Boolean,
+  def insertRepository(repositoryName: String, userName: String, description: Option[String], isPrivate: Boolean,
                        originRepositoryName: Option[String] = None, originUserName: Option[String] = None,
                        parentRepositoryName: Option[String] = None, parentUserName: Option[String] = None)
                       (implicit s: Session): Unit = {
@@ -194,10 +195,9 @@ trait RepositoryService { self: AccountService =>
    * 
    * @param userName the user name of the repository owner
    * @param repositoryName the repository name
-   * @param baseUrl the base url of this application
    * @return the repository information
    */
-  def getRepository(userName: String, repositoryName: String, baseUrl: String)(implicit s: Session): Option[RepositoryInfo] = {
+  def getRepository(userName: String, repositoryName: String)(implicit s: Session): Option[RepositoryInfo] = {
     (Repositories filter { t => t.byRepository(userName, repositoryName) } firstOption) map { repository =>
       // for getting issue count and pull request count
       val issues = Issues.filter { t =>
@@ -205,7 +205,7 @@ trait RepositoryService { self: AccountService =>
       }.map(_.pullRequest).list
 
       new RepositoryInfo(
-        JGitUtil.getRepositoryInfo(repository.userName, repository.repositoryName, baseUrl),
+        JGitUtil.getRepositoryInfo(repository.userName, repository.repositoryName),
         repository,
         issues.count(_ == false),
         issues.count(_ == true),
@@ -234,7 +234,7 @@ trait RepositoryService { self: AccountService =>
     }.list
   }
 
-  def getUserRepositories(userName: String, baseUrl: String, withoutPhysicalInfo: Boolean = false)
+  def getUserRepositories(userName: String, withoutPhysicalInfo: Boolean = false)
                          (implicit s: Session): List[RepositoryInfo] = {
     Repositories.filter { t1 =>
       (t1.userName === userName.bind) ||
@@ -242,9 +242,9 @@ trait RepositoryService { self: AccountService =>
     }.sortBy(_.lastActivityDate desc).list.map{ repository =>
       new RepositoryInfo(
         if(withoutPhysicalInfo){
-          new JGitUtil.RepositoryInfo(repository.userName, repository.repositoryName, baseUrl)
+          new JGitUtil.RepositoryInfo(repository.userName, repository.repositoryName)
         } else {
-          JGitUtil.getRepositoryInfo(repository.userName, repository.repositoryName, baseUrl)
+          JGitUtil.getRepositoryInfo(repository.userName, repository.repositoryName)
         },
         repository,
         getForkedCount(
@@ -260,13 +260,12 @@ trait RepositoryService { self: AccountService =>
    * If repositoryUserName is given then filters results by repository owner.
    *
    * @param loginAccount the logged in account
-   * @param baseUrl the base url of this application
    * @param repositoryUserName the repository owner (if None then returns all repositories which are visible for logged in user)
    * @param withoutPhysicalInfo if true then the result does not include physical repository information such as commit count,
    *                            branches and tags
    * @return the repository information which is sorted in descending order of lastActivityDate.
    */
-  def getVisibleRepositories(loginAccount: Option[Account], baseUrl: String, repositoryUserName: Option[String] = None,
+  def getVisibleRepositories(loginAccount: Option[Account], repositoryUserName: Option[String] = None,
                              withoutPhysicalInfo: Boolean = false)
                             (implicit s: Session): List[RepositoryInfo] = {
     (loginAccount match {
@@ -284,9 +283,9 @@ trait RepositoryService { self: AccountService =>
     }.sortBy(_.lastActivityDate desc).list.map{ repository =>
       new RepositoryInfo(
         if(withoutPhysicalInfo){
-          new JGitUtil.RepositoryInfo(repository.userName, repository.repositoryName, baseUrl)
+          new JGitUtil.RepositoryInfo(repository.userName, repository.repositoryName)
         } else {
-          JGitUtil.getRepositoryInfo(repository.userName, repository.repositoryName, baseUrl)
+          JGitUtil.getRepositoryInfo(repository.userName, repository.repositoryName)
         },
         repository,
         getForkedCount(
@@ -389,32 +388,39 @@ trait RepositoryService { self: AccountService =>
 
 object RepositoryService {
 
-  case class RepositoryInfo(owner: String, name: String, httpUrl: String, repository: Repository,
+  case class RepositoryInfo(owner: String, name: String, repository: Repository,
     issueCount: Int, pullCount: Int, commitCount: Int, forkedCount: Int,
-    branchList: Seq[String], tags: Seq[JGitUtil.TagInfo], managers: Seq[String]){
-
-    lazy val host = """^https?://(.+?)(:\d+)?/""".r.findFirstMatchIn(httpUrl).get.group(1)
-
-    def sshUrl(port: Int, userName: String) = s"ssh://${userName}@${host}:${port}/${owner}/${name}.git"
-
-    def sshOpenRepoUrl(platform: String, port: Int, userName: String) = openRepoUrl(platform, sshUrl(port, userName))
-
-    def httpOpenRepoUrl(platform: String) = openRepoUrl(platform, httpUrl)
-
-    def openRepoUrl(platform: String, openUrl: String) = s"github-${platform}://openRepo/${openUrl}"
+    branchList: Seq[String], tags: Seq[JGitUtil.TagInfo], managers: Seq[String]) {
 
     /**
      * Creates instance with issue count and pull request count.
      */
     def this(repo: JGitUtil.RepositoryInfo, model: Repository, issueCount: Int, pullCount: Int, forkedCount: Int, managers: Seq[String]) =
-      this(repo.owner, repo.name, repo.url, model, issueCount, pullCount, repo.commitCount, forkedCount, repo.branchList, repo.tags, managers)
+      this(
+        repo.owner, repo.name, model,
+        issueCount, pullCount, repo.commitCount, forkedCount,
+        repo.branchList, repo.tags, managers)
 
     /**
      * Creates instance without issue count and pull request count.
      */
-    def this(repo: JGitUtil.RepositoryInfo, model: Repository, forkedCount: Int, managers: Seq[String]) =
-      this(repo.owner, repo.name, repo.url, model, 0, 0, repo.commitCount, forkedCount, repo.branchList, repo.tags, managers)
+    def this(repo: JGitUtil.RepositoryInfo, model: Repository, 	forkedCount: Int, managers: Seq[String]) =
+      this(
+        repo.owner, repo.name, model,
+        0, 0, repo.commitCount, forkedCount,
+        repo.branchList, repo.tags, managers)
+
+    def httpUrl(implicit context: Context): String = RepositoryService.httpUrl(owner, name)
+    def sshUrl(implicit context: Context): Option[String] = RepositoryService.sshUrl(owner, name)
   }
 
-  case class RepositoryTreeNode(owner: String, name: String, children: List[RepositoryTreeNode])
+  def httpUrl(owner: String, name: String)(implicit context: Context): String = s"${context.baseUrl}/git/${owner}/${name}.git"
+  def sshUrl(owner: String, name: String)(implicit context: Context): Option[String] =
+    if(context.settings.ssh){
+      context.loginAccount.flatMap { loginAccount =>
+        context.settings.sshAddress.map { x => s"ssh://${loginAccount.userName}@${x.host}:${x.port}/${owner}/${name}.git" }
+      }
+    } else None
+  def openRepoUrl(openUrl: String)(implicit context: Context): String = s"github-${context.platform}://openRepo/${openUrl}"
+
 }

src/main/scala/gitbucket/core/service/SystemSettingsService.scala

@@ -1,6 +1,7 @@
 package gitbucket.core.service
 
 import gitbucket.core.util.{Directory, ControlUtil}
+import gitbucket.core.util.Implicits._
 import Directory._
 import ControlUtil._
 import SystemSettingsService._
@@ -21,6 +22,7 @@ trait SystemSettingsService {
       props.setProperty(Notification, settings.notification.toString)
       settings.activityLogLimit.foreach(x => props.setProperty(ActivityLogLimit, x.toString))
       props.setProperty(Ssh, settings.ssh.toString)
+      settings.sshHost.foreach(x => props.setProperty(SshHost, x.trim))
       settings.sshPort.foreach(x => props.setProperty(SshPort, x.toString))
       props.setProperty(UseSMTP, settings.useSMTP.toString)
       if(settings.useSMTP) {
@@ -75,6 +77,7 @@ trait SystemSettingsService {
         getValue(props, Notification, false),
         getOptionValue[Int](props, ActivityLogLimit, None),
         getValue(props, Ssh, false),
+        getOptionValue[String](props, SshHost, None).map(_.trim),
         getOptionValue(props, SshPort, Some(DefaultSshPort)),
         getValue(props, UseSMTP, getValue(props, Notification, false)),   // handle migration scenario from only notification to useSMTP
         if(getValue(props, UseSMTP, getValue(props, Notification, false))){
@@ -126,16 +129,19 @@ object SystemSettingsService {
     notification: Boolean,
     activityLogLimit: Option[Int],
     ssh: Boolean,
+    sshHost: Option[String],
     sshPort: Option[Int],
     useSMTP: Boolean,
     smtp: Option[Smtp],
     ldapAuthentication: Boolean,
     ldap: Option[Ldap]){
-    def baseUrl(request: HttpServletRequest): String = baseUrl.getOrElse {
-      defining(request.getRequestURL.toString){ url =>
-        url.substring(0, url.length - (request.getRequestURI.length - request.getContextPath.length))
+    def baseUrl(request: HttpServletRequest): String = baseUrl.fold(request.baseUrl)(_.stripSuffix("/"))
+
+    def sshAddress:Option[SshAddress] =
+      for {
+        host <- sshHost if ssh
       }
-    }.stripSuffix("/")
+      yield SshAddress(host, sshPort.getOrElse(DefaultSshPort))
   }
 
   case class Ldap(
@@ -161,6 +167,10 @@ object SystemSettingsService {
     fromAddress: Option[String],
     fromName: Option[String])
 
+  case class SshAddress(
+    host:String,
+    port:Int)
+
   val DefaultSshPort = 29418
   val DefaultSmtpPort = 25
   val DefaultLdapPort = 389
@@ -174,6 +184,7 @@ object SystemSettingsService {
   private val Notification = "notification"
   private val ActivityLogLimit = "activity_log_limit"
   private val Ssh = "ssh"
+  private val SshHost = "ssh.host"
   private val SshPort = "ssh.port"
   private val UseSMTP = "useSMTP"
   private val SmtpHost = "smtp.host"
@@ -216,7 +227,4 @@ object SystemSettingsService {
       else value
     }
 
-//  // TODO temporary flag
-//  val enablePluginSystem = Option(System.getProperty("enable.plugin")).getOrElse("false").toBoolean
-
 }

src/main/scala/gitbucket/core/service/WebHookService.scala

@@ -1,13 +1,16 @@
 package gitbucket.core.service
 
+import java.io.ByteArrayInputStream
+import fr.brouillard.oss.security.xhub.XHub
+import fr.brouillard.oss.security.xhub.XHub.{XHubDigest, XHubConverter}
 import gitbucket.core.api._
 import gitbucket.core.model.{WebHook, Account, Issue, PullRequest, IssueComment, WebHookEvent, CommitComment}
 import gitbucket.core.model.Profile._
+import org.apache.http.client.utils.URLEncodedUtils
 import profile.simple._
 import gitbucket.core.util.JGitUtil.CommitInfo
 import gitbucket.core.util.RepositoryName
 import gitbucket.core.service.RepositoryService.RepositoryInfo
-
 import org.apache.http.NameValuePair
 import org.apache.http.client.entity.UrlEncodedFormEntity
 import org.apache.http.message.BasicNameValuePair
@@ -17,6 +20,8 @@ import org.slf4j.LoggerFactory
 import scala.concurrent._
 import org.apache.http.HttpRequest
 import org.apache.http.HttpResponse
+import gitbucket.core.model.WebHookContentType
+import org.apache.http.client.entity.EntityBuilder
 
 
 trait WebHookService {
@@ -33,8 +38,11 @@ trait WebHookService {
 
   /** get All WebHook informations of repository event */
   def getWebHooksByEvent(owner: String, repository: String, event: WebHook.Event)(implicit s: Session): List[WebHook] =
-    WebHookEvents.filter(t => t.byRepository(owner, repository) && t.event === event.bind)
-      .list.map(t => WebHook(t.userName, t.repositoryName, t.url))
+     WebHooks.filter(_.byRepository(owner, repository))
+       .innerJoin(WebHookEvents).on { (wh, whe) => whe.byWebHook(wh) }
+       .filter{ case (wh, whe) => whe.event === event.bind}
+       .map{ case (wh, whe) => wh }
+       .list.distinct
 
   /** get All WebHook information from repository to url */
   def getWebHook(owner: String, repository: String, url: String)(implicit s: Session): Option[(WebHook, Set[WebHook.Event])] =
@@ -44,14 +52,15 @@ trait WebHookService {
       .map{ case (w,t) => w -> t.event }
       .list.groupBy(_._1).mapValues(_.map(_._2).toSet).headOption
 
-  def addWebHook(owner: String, repository: String, url :String, events: Set[WebHook.Event])(implicit s: Session): Unit = {
-    WebHooks insert WebHook(owner, repository, url)
+  def addWebHook(owner: String, repository: String, url :String, events: Set[WebHook.Event], ctype: WebHookContentType,  token: Option[String])(implicit s: Session): Unit = {
+    WebHooks insert WebHook(owner, repository, url, ctype, token)
     events.toSet.map{ event: WebHook.Event =>
       WebHookEvents insert WebHookEvent(owner, repository, url, event)
     }
   }
 
-  def updateWebHook(owner: String, repository: String, url :String, events: Set[WebHook.Event])(implicit s: Session): Unit = {
+  def updateWebHook(owner: String, repository: String, url :String, events: Set[WebHook.Event], ctype: WebHookContentType, token: Option[String])(implicit s: Session): Unit = {
+    WebHooks.filter(_.byPrimaryKey(owner, repository, url)).map(w => (w.ctype, w.token)).update((ctype, token))
     WebHookEvents.filter(_.byWebHook(owner, repository, url)).delete
     events.toSet.map{ event: WebHook.Event =>
       WebHookEvents insert WebHookEvent(owner, repository, url, event)
@@ -69,17 +78,17 @@ trait WebHookService {
     }
   }
 
-  def callWebHook(event: WebHook.Event, webHookURLs: List[WebHook], payload: WebHookPayload)
+  def callWebHook(event: WebHook.Event, webHooks: List[WebHook], payload: WebHookPayload)
                  (implicit c: JsonFormat.Context): List[(WebHook, String, Future[HttpRequest], Future[HttpResponse])] = {
     import org.apache.http.impl.client.HttpClientBuilder
     import ExecutionContext.Implicits.global
     import org.apache.http.protocol.HttpContext
     import org.apache.http.client.methods.HttpPost
 
-    if(webHookURLs.nonEmpty){
+    if(webHooks.nonEmpty){
       val json = JsonFormat(payload)
 
-      webHookURLs.map { webHookUrl =>
+      webHooks.map { webHook =>
         val reqPromise = Promise[HttpRequest]
         val f = Future {
           val itcp = new org.apache.http.HttpRequestInterceptor{
@@ -89,19 +98,36 @@ trait WebHookService {
           }
           try{
             val httpClient = HttpClientBuilder.create.addInterceptorLast(itcp).build
-            logger.debug(s"start web hook invocation for ${webHookUrl.url}")
-            val httpPost = new HttpPost(webHookUrl.url)
-            httpPost.addHeader("Content-Type", "application/x-www-form-urlencoded")
+            logger.debug(s"start web hook invocation for ${webHook.url}")
+            val httpPost = new HttpPost(webHook.url)
+            logger.info(s"Content-Type: ${webHook.ctype.ctype}")
+            httpPost.addHeader("Content-Type", webHook.ctype.ctype)
             httpPost.addHeader("X-Github-Event", event.name)
             httpPost.addHeader("X-Github-Delivery", java.util.UUID.randomUUID().toString)
 
-            val params: java.util.List[NameValuePair] = new java.util.ArrayList()
-            params.add(new BasicNameValuePair("payload", json))
-            httpPost.setEntity(new UrlEncodedFormEntity(params, "UTF-8"))
+            webHook.ctype match {
+              case WebHookContentType.FORM => {
+            	  val params: java.util.List[NameValuePair] = new java.util.ArrayList()
+                params.add(new BasicNameValuePair("payload", json))
+                def postContent = new UrlEncodedFormEntity(params, "UTF-8")
+                httpPost.setEntity(postContent)
+                if (webHook.token.exists(_.trim.nonEmpty)) {
+                  // TODO find a better way and see how to extract content from postContent
+                  val contentAsBytes = URLEncodedUtils.format(params, "UTF-8").getBytes("UTF-8")
+                  httpPost.addHeader("X-Hub-Signature", XHub.generateHeaderXHubToken(XHubConverter.HEXA_LOWERCASE, XHubDigest.SHA1, webHook.token.get, contentAsBytes))
+                }
+              }
+              case WebHookContentType.JSON => {
+            	  httpPost.setEntity(EntityBuilder.create().setText(json).build())
+                if (!webHook.token.isEmpty) {
+                  httpPost.addHeader("X-Hub-Signature", XHub.generateHeaderXHubToken(XHubConverter.HEXA_LOWERCASE, XHubDigest.SHA1, webHook.token.orNull, json.getBytes("UTF-8")))
+                }
+              }
+            }
 
             val res = httpClient.execute(httpPost)
             httpPost.releaseConnection()
-            logger.debug(s"end web hook invocation for ${webHookUrl}")
+            logger.debug(s"end web hook invocation for ${webHook}")
             res
           }catch{
             case e:Throwable => {
@@ -113,12 +139,12 @@ trait WebHookService {
           }
         }
         f.onSuccess {
-          case s => logger.debug(s"Success: web hook request to ${webHookUrl.url}")
+          case s => logger.debug(s"Success: web hook request to ${webHook.url}")
         }
         f.onFailure {
-          case t => logger.error(s"Failed: web hook request to ${webHookUrl.url}", t)
+          case t => logger.error(s"Failed: web hook request to ${webHook.url}", t)
         }
-        (webHookUrl, json, reqPromise.future, f)
+        (webHook, json, reqPromise.future, f)
       }
     } else {
       Nil
@@ -161,7 +187,7 @@ trait WebHookPullRequestService extends WebHookService {
         baseOwner <- users.get(repository.owner)
         headOwner <- users.get(pullRequest.requestUserName)
         issueUser <- users.get(issue.openedUserName)
-        headRepo  <- getRepository(pullRequest.requestUserName, pullRequest.requestRepositoryName, baseUrl)
+        headRepo  <- getRepository(pullRequest.requestUserName, pullRequest.requestRepositoryName)
       } yield {
         WebHookPullRequestPayload(
           action         = action,
@@ -200,7 +226,7 @@ trait WebHookPullRequestService extends WebHookService {
     import WebHookService._
     for{
       ((issue, issueUser, pullRequest, baseOwner, headOwner), webHooks) <- getPullRequestsByRequestForWebhook(requestRepository.owner, requestRepository.name, requestBranch)
-      baseRepo <- getRepository(pullRequest.userName, pullRequest.repositoryName, baseUrl)
+      baseRepo <- getRepository(pullRequest.userName, pullRequest.repositoryName)
     } yield {
       val payload = WebHookPullRequestPayload(
         action         = action,
@@ -229,7 +255,7 @@ trait WebHookPullRequestReviewCommentService extends WebHookService {
         baseOwner <- users.get(repository.owner)
         headOwner <- users.get(pullRequest.requestUserName)
         issueUser <- users.get(issue.openedUserName)
-        headRepo  <- getRepository(pullRequest.requestUserName, pullRequest.requestRepositoryName, baseUrl)
+        headRepo  <- getRepository(pullRequest.requestUserName, pullRequest.requestRepositoryName)
       } yield {
         WebHookPullRequestReviewCommentPayload(
           action         = action,

src/main/scala/gitbucket/core/service/WikiService.scala

@@ -1,7 +1,9 @@
 package gitbucket.core.service
 
 import java.util.Date
+import gitbucket.core.controller.Context
 import gitbucket.core.model.Account
+import gitbucket.core.service.RepositoryService.RepositoryInfo
 import gitbucket.core.util._
 import gitbucket.core.util.ControlUtil._
 import org.eclipse.jgit.api.Git
@@ -13,7 +15,6 @@ import java.io.ByteArrayInputStream
 import org.eclipse.jgit.patch._
 import org.eclipse.jgit.api.errors.PatchFormatException
 import scala.collection.JavaConverters._
-import RepositoryService.RepositoryInfo
 
 object WikiService {
   
@@ -38,10 +39,13 @@ object WikiService {
    */
   case class WikiPageHistoryInfo(name: String, committer: String, message: String, date: Date)
 
-  def httpUrl(repository: RepositoryInfo) = repository.httpUrl.replaceFirst("\\.git\\Z", ".wiki.git")
 
-  def sshUrl(repository: RepositoryInfo, settings: SystemSettingsService.SystemSettings, userName: String) =
-    repository.sshUrl(settings.sshPort.getOrElse(SystemSettingsService.DefaultSshPort), userName).replaceFirst("\\.git\\Z", ".wiki.git")
+  def wikiHttpUrl(repositoryInfo: RepositoryInfo)(implicit context: Context): String
+    = RepositoryService.httpUrl(repositoryInfo.owner, repositoryInfo.name + ".wiki")
+
+  def wikiSshUrl(repositoryInfo: RepositoryInfo)(implicit context: Context): Option[String]
+    = RepositoryService.sshUrl(repositoryInfo.owner, repositoryInfo.name + ".wiki")
+
 }
 
 trait WikiService {

src/main/scala/gitbucket/core/servlet/AutoUpdate.scala

@@ -1,184 +0,0 @@
-package gitbucket.core.servlet
-
-import java.io.File
-import java.sql.{DriverManager, Connection}
-import gitbucket.core.plugin.PluginRegistry
-import gitbucket.core.service.SystemSettingsService
-import gitbucket.core.util._
-import org.apache.commons.io.FileUtils
-import javax.servlet.{ServletContextListener, ServletContextEvent}
-import org.slf4j.LoggerFactory
-import Directory._
-import ControlUtil._
-import JDBCUtil._
-import org.eclipse.jgit.api.Git
-import gitbucket.core.util.Versions
-import gitbucket.core.util.Directory
-
-object AutoUpdate {
-
-  /**
-   * The history of versions. A head of this sequence is the current GitBucket version.
-   */
-  val versions = Seq(
-    new Version(3, 11),
-    new Version(3, 10),
-    new Version(3, 9),
-    new Version(3, 8),
-    new Version(3, 7) with SystemSettingsService {
-      override def update(conn: Connection, cl: ClassLoader): Unit = {
-        super.update(conn, cl)
-        val settings = loadSystemSettings()
-        if(settings.notification){
-          saveSystemSettings(settings.copy(useSMTP = true))
-        }
-      }
-    },
-    new Version(3, 6),
-    new Version(3, 5),
-    new Version(3, 4),
-    new Version(3, 3),
-    new Version(3, 2),
-    new Version(3, 1),
-    new Version(3, 0),
-    new Version(2, 8),
-    new Version(2, 7) {
-      override def update(conn: Connection, cl: ClassLoader): Unit = {
-        super.update(conn, cl)
-        conn.select("SELECT * FROM REPOSITORY"){ rs =>
-          // Rename attached files directory from /issues to /comments
-          val userName = rs.getString("USER_NAME")
-          val repoName = rs.getString("REPOSITORY_NAME")
-          defining(Directory.getAttachedDir(userName, repoName)){ newDir =>
-            val oldDir = new File(newDir.getParentFile, "issues")
-            if(oldDir.exists && oldDir.isDirectory){
-              oldDir.renameTo(newDir)
-            }
-          }
-          // Update ORIGIN_USER_NAME and ORIGIN_REPOSITORY_NAME if it does not exist
-          val originalUserName = rs.getString("ORIGIN_USER_NAME")
-          val originalRepoName = rs.getString("ORIGIN_REPOSITORY_NAME")
-          if(originalUserName != null && originalRepoName != null){
-            if(conn.selectInt("SELECT COUNT(*) FROM REPOSITORY WHERE USER_NAME = ? AND REPOSITORY_NAME = ?",
-              originalUserName, originalRepoName) == 0){
-              conn.update("UPDATE REPOSITORY SET ORIGIN_USER_NAME = NULL, ORIGIN_REPOSITORY_NAME = NULL " +
-                "WHERE USER_NAME = ? AND REPOSITORY_NAME = ?", userName, repoName)
-            }
-          }
-          // Update PARENT_USER_NAME and PARENT_REPOSITORY_NAME if it does not exist
-          val parentUserName = rs.getString("PARENT_USER_NAME")
-          val parentRepoName = rs.getString("PARENT_REPOSITORY_NAME")
-          if(parentUserName != null && parentRepoName != null){
-            if(conn.selectInt("SELECT COUNT(*) FROM REPOSITORY WHERE USER_NAME = ? AND REPOSITORY_NAME = ?",
-              parentUserName, parentRepoName) == 0){
-              conn.update("UPDATE REPOSITORY SET PARENT_USER_NAME = NULL, PARENT_REPOSITORY_NAME = NULL " +
-                "WHERE USER_NAME = ? AND REPOSITORY_NAME = ?", userName, repoName)
-            }
-          }
-        }
-      }
-    },
-    new Version(2, 6),
-    new Version(2, 5),
-    new Version(2, 4),
-    new Version(2, 3) {
-      override def update(conn: Connection, cl: ClassLoader): Unit = {
-        super.update(conn, cl)
-        conn.select("SELECT ACTIVITY_ID, ADDITIONAL_INFO FROM ACTIVITY WHERE ACTIVITY_TYPE='push'"){ rs =>
-          val curInfo = rs.getString("ADDITIONAL_INFO")
-          val newInfo = curInfo.split("\n").filter(_ matches "^[0-9a-z]{40}:.*").mkString("\n")
-          if (curInfo != newInfo) {
-            conn.update("UPDATE ACTIVITY SET ADDITIONAL_INFO = ? WHERE ACTIVITY_ID = ?", newInfo, rs.getInt("ACTIVITY_ID"))
-          }
-        }
-        ignore {
-          FileUtils.deleteDirectory(Directory.getPluginCacheDir())
-          //FileUtils.deleteDirectory(new File(Directory.PluginHome))
-        }
-      }
-    },
-    new Version(2, 2),
-    new Version(2, 1),
-    new Version(2, 0){
-      override def update(conn: Connection, cl: ClassLoader): Unit = {
-        import eu.medsea.mimeutil.{MimeUtil2, MimeType}
-
-        val mimeUtil = new MimeUtil2()
-        mimeUtil.registerMimeDetector("eu.medsea.mimeutil.detector.MagicMimeMimeDetector")
-
-        super.update(conn, cl)
-        conn.select("SELECT USER_NAME, REPOSITORY_NAME FROM REPOSITORY"){ rs =>
-          defining(Directory.getAttachedDir(rs.getString("USER_NAME"), rs.getString("REPOSITORY_NAME"))){ dir =>
-            if(dir.exists && dir.isDirectory){
-              dir.listFiles.foreach { file =>
-                if(file.getName.indexOf('.') < 0){
-                  val mimeType = MimeUtil2.getMostSpecificMimeType(mimeUtil.getMimeTypes(file, new MimeType("application/octet-stream"))).toString
-                  if(mimeType.startsWith("image/")){
-                    file.renameTo(new File(file.getParent, file.getName + "." + mimeType.split("/")(1)))
-                  }
-                }
-              }
-            }
-          }
-        }
-      }
-    },
-    Version(1, 13),
-    Version(1, 12),
-    Version(1, 11),
-    Version(1, 10),
-    Version(1, 9),
-    Version(1, 8),
-    Version(1, 7),
-    Version(1, 6),
-    Version(1, 5),
-    Version(1, 4),
-    new Version(1, 3){
-      override def update(conn: Connection, cl: ClassLoader): Unit = {
-        super.update(conn, cl)
-        // Fix wiki repository configuration
-        conn.select("SELECT USER_NAME, REPOSITORY_NAME FROM REPOSITORY"){ rs =>
-          using(Git.open(getWikiRepositoryDir(rs.getString("USER_NAME"), rs.getString("REPOSITORY_NAME")))){ git =>
-            defining(git.getRepository.getConfig){ config =>
-              if(!config.getBoolean("http", "receivepack", false)){
-                config.setBoolean("http", null, "receivepack", true)
-                config.save
-              }
-            }
-          }
-        }
-      }
-    },
-    Version(1, 2),
-    Version(1, 1),
-    Version(1, 0),
-    Version(0, 0)
-  )
-
-  /**
-   * The head version of GitBucket.
-   */
-  val headVersion = versions.head
-
-  /**
-   * The version file (GITBUCKET_HOME/version).
-   */
-  lazy val versionFile = new File(GitBucketHome, "version")
-
-  /**
-   * Returns the current version from the version file.
-   */
-  def getCurrentVersion(): Version = {
-    if(versionFile.exists){
-      FileUtils.readFileToString(versionFile, "UTF-8").trim.split("\\.") match {
-        case Array(majorVersion, minorVersion) => {
-          versions.find { v =>
-            v.majorVersion == majorVersion.toInt && v.minorVersion == minorVersion.toInt
-          }.getOrElse(Version(0, 0))
-        }
-        case _ => Version(0, 0)
-      }
-    } else Version(0, 0)
-  }
-
-}

src/main/scala/gitbucket/core/servlet/BasicAuthenticationFilter.scala

@@ -74,7 +74,7 @@ class BasicAuthenticationFilter extends Filter with RepositoryService with Accou
 
     request.paths match {
       case Array(_, repositoryOwner, repositoryName, _*) =>
-        getRepository(repositoryOwner, repositoryName.replaceFirst("\\.wiki\\.git$|\\.git$", ""), "") match {
+        getRepository(repositoryOwner, repositoryName.replaceFirst("\\.wiki\\.git$|\\.git$", "")) match {
           case Some(repository) => {
             if(!isUpdating && !repository.repository.isPrivate && settings.allowAnonymousAccess){
               chain.doFilter(request, response)

src/main/scala/gitbucket/core/servlet/GitRepositoryServlet.scala

@@ -10,7 +10,6 @@ import gitbucket.core.service.WebHookService._
 import gitbucket.core.service._
 import gitbucket.core.util.ControlUtil._
 import gitbucket.core.util.Implicits._
-import gitbucket.core.util.JGitUtil.CommitInfo
 import gitbucket.core.util._
 
 import org.eclipse.jgit.api.Git
@@ -160,7 +159,7 @@ class CommitLogHook(owner: String, repository: String, pusher: String, baseUrl:
             countIssue(IssueSearchCondition(state = "open"), false, owner -> repository) +
             countIssue(IssueSearchCondition(state = "closed"), false, owner -> repository)
 
-          val repositoryInfo = getRepository(owner, repository, baseUrl).get
+          val repositoryInfo = getRepository(owner, repository).get
 
           // Extract new commit and apply issue comment
           val defaultBranch = repositoryInfo.repository.defaultBranch
@@ -168,7 +167,7 @@ class CommitLogHook(owner: String, repository: String, pusher: String, baseUrl:
             if (!existIds.contains(commit.id) && !pushedIds.contains(commit.id)) {
               if (issueCount > 0) {
                 pushedIds.add(commit.id)
-                createIssueComment(commit)
+                createIssueComment(owner, repository, commit)
                 // close issues
                 if(refName(1) == "heads" && branchName == defaultBranch && command.getType == ReceiveCommand.Type.UPDATE){
                   closeIssuesFromMessage(commit.fullMessage, pusher, owner, repository)
@@ -230,13 +229,4 @@ class CommitLogHook(owner: String, repository: String, pusher: String, baseUrl:
     }
   }
 
-  private def createIssueComment(commit: CommitInfo) = {
-    StringUtil.extractIssueId(commit.fullMessage).foreach { issueId =>
-      if(getIssue(owner, repository, issueId).isDefined){
-        getAccountByMailAddress(commit.committerEmailAddress).foreach { account =>
-          createComment(owner, repository, account.userName, issueId.toInt, commit.fullMessage + " " + commit.id, "commit")
-        }
-      }
-    }
-  }
 }

src/main/scala/gitbucket/core/servlet/InitializeListener.scala

@@ -1,16 +1,22 @@
 package gitbucket.core.servlet
 
+import java.io.File
+
 import akka.event.Logging
 import com.typesafe.config.ConfigFactory
+import gitbucket.core.GitBucketCoreModule
 import gitbucket.core.plugin.PluginRegistry
 import gitbucket.core.service.{ActivityService, SystemSettingsService}
-import org.apache.commons.io.FileUtils
+import gitbucket.core.util.DatabaseConfig
+import gitbucket.core.util.Directory._
+import gitbucket.core.util.JDBCUtil._
+import io.github.gitbucket.solidbase.Solidbase
+import io.github.gitbucket.solidbase.manager.JDBCVersionManager
 import javax.servlet.{ServletContextListener, ServletContextEvent}
+import org.apache.commons.io.FileUtils
 import org.slf4j.LoggerFactory
-import gitbucket.core.util.Versions
 import akka.actor.{Actor, Props, ActorSystem}
 import com.typesafe.akka.extension.quartz.QuartzSchedulerExtension
-import AutoUpdate._
 
 /**
  * Initialize GitBucket system.
@@ -30,14 +36,49 @@ class InitializeListener extends ServletContextListener with SystemSettingsServi
     Database() withTransaction { session =>
       val conn = session.conn
 
-      // Migration
-      logger.debug("Start schema update")
-      Versions.update(conn, headVersion, getCurrentVersion(), versions, Thread.currentThread.getContextClassLoader){ conn =>
-        FileUtils.writeStringToFile(versionFile, headVersion.versionString, "UTF-8")
+      // Check version
+      val versionFile = new File(GitBucketHome, "version")
+
+      if(versionFile.exists()){
+        val version = FileUtils.readFileToString(versionFile, "UTF-8")
+        if(version == "3.14"){
+          // Initialization for GitBucket 3.14
+          logger.info("Migration to GitBucket 4.x start")
+
+          // Backup current data
+          val dataMvFile = new File(GitBucketHome, "data.mv.db")
+          if(dataMvFile.exists) {
+            FileUtils.copyFile(dataMvFile, new File(GitBucketHome, "data.mv.db_3.14"))
+          }
+          val dataTraceFile = new File(GitBucketHome, "data.trace.db")
+          if(dataTraceFile.exists) {
+            FileUtils.copyFile(dataTraceFile, new File(GitBucketHome, "data.trace.db_3.14"))
+          }
+
+          // Change form
+          val manager = new JDBCVersionManager(conn)
+          manager.initialize()
+          manager.updateVersion(GitBucketCoreModule.getModuleId, "4.0")
+          conn.select("SELECT PLUGIN_ID, VERSION FROM PLUGIN"){ rs =>
+            manager.updateVersion(rs.getString("PLUGIN_ID"), rs.getString("VERSION"))
+          }
+          conn.update("DROP TABLE PLUGIN")
+          versionFile.delete()
+
+          logger.info("Migration to GitBucket 4.x completed")
+
+        } else {
+          throw new Exception("GitBucket can't migrate from this version. Please update to 3.14 at first.")
+        }
       }
 
+      // Run normal migration
+      logger.info("Start schema update")
+      val solidbase = new Solidbase()
+      solidbase.migrate(conn, Thread.currentThread.getContextClassLoader, DatabaseConfig.liquiDriver, GitBucketCoreModule)
+
       // Load plugins
-      logger.debug("Initialize plugins")
+      logger.info("Initialize plugins")
       PluginRegistry.initialize(event.getServletContext, loadSystemSettings(), conn)
     }
 

src/main/scala/gitbucket/core/servlet/TransactionFilter.scala

@@ -2,7 +2,7 @@ package gitbucket.core.servlet
 
 import javax.servlet._
 import javax.servlet.http.HttpServletRequest
-import com.mchange.v2.c3p0.ComboPooledDataSource
+import com.zaxxer.hikari._
 import gitbucket.core.util.DatabaseConfig
 import org.scalatra.ScalatraBase
 import org.slf4j.LoggerFactory
@@ -46,14 +46,14 @@ object Database {
 
   private val logger = LoggerFactory.getLogger(Database.getClass)
 
-  private val dataSource: ComboPooledDataSource = {
-    val ds = new ComboPooledDataSource
-    ds.setDriverClass(DatabaseConfig.driver)
-    ds.setJdbcUrl(DatabaseConfig.url)
-    ds.setUser(DatabaseConfig.user)
-    ds.setPassword(DatabaseConfig.password)
+  private val dataSource: HikariDataSource = {
+    val config = new HikariConfig()
+    config.setDriverClassName(DatabaseConfig.jdbcDriver)
+    config.setJdbcUrl(DatabaseConfig.url)
+    config.setUsername(DatabaseConfig.user)
+    config.setPassword(DatabaseConfig.password)
     logger.debug("load database connection pool")
-    ds
+    new HikariDataSource(config)
   }
 
   private val db: SlickDatabase = {

src/main/scala/gitbucket/core/ssh/GitCommand.scala

@@ -87,11 +87,11 @@ abstract class DefaultGitCommand(val owner: String, val repoName: String) extend
 }
 
 
-class DefaultGitUploadPack(owner: String, repoName: String, baseUrl: String) extends DefaultGitCommand(owner, repoName)
+class DefaultGitUploadPack(owner: String, repoName: String) extends DefaultGitCommand(owner, repoName)
     with RepositoryService with AccountService {
 
   override protected def runTask(user: String)(implicit session: Session): Unit = {
-    getRepository(owner, repoName.replaceFirst("\\.wiki\\Z", ""), baseUrl).foreach { repositoryInfo =>
+    getRepository(owner, repoName.replaceFirst("\\.wiki\\Z", "")).foreach { repositoryInfo =>
       if(!repositoryInfo.repository.isPrivate || isWritableUser(user, repositoryInfo)){
         using(Git.open(getRepositoryDir(owner, repoName))) { git =>
           val repository = git.getRepository
@@ -107,7 +107,7 @@ class DefaultGitReceivePack(owner: String, repoName: String, baseUrl: String) ex
     with RepositoryService with AccountService {
 
   override protected def runTask(user: String)(implicit session: Session): Unit = {
-    getRepository(owner, repoName.replaceFirst("\\.wiki\\Z", ""), baseUrl).foreach { repositoryInfo =>
+    getRepository(owner, repoName.replaceFirst("\\.wiki\\Z", "")).foreach { repositoryInfo =>
       if(isWritableUser(user, repositoryInfo)){
         using(Git.open(getRepositoryDir(owner, repoName))) { git =>
           val repository = git.getRepository
@@ -124,7 +124,7 @@ class DefaultGitReceivePack(owner: String, repoName: String, baseUrl: String) ex
   }
 }
 
-class PluginGitUploadPack(repoName: String, baseUrl: String, routing: GitRepositoryRouting) extends GitCommand
+class PluginGitUploadPack(repoName: String, routing: GitRepositoryRouting) extends GitCommand
     with SystemSettingsService {
 
   override protected def runTask(user: String)(implicit session: Session): Unit = {
@@ -139,7 +139,7 @@ class PluginGitUploadPack(repoName: String, baseUrl: String, routing: GitReposit
   }
 }
 
-class PluginGitReceivePack(repoName: String, baseUrl: String, routing: GitRepositoryRouting) extends GitCommand
+class PluginGitReceivePack(repoName: String, routing: GitRepositoryRouting) extends GitCommand
     with SystemSettingsService {
 
   override protected def runTask(user: String)(implicit session: Session): Unit = {
@@ -163,9 +163,9 @@ class GitCommandFactory(baseUrl: String) extends CommandFactory {
     logger.debug(s"command: $command")
 
     command match {
-      case SimpleCommandRegex ("upload" , repoName) if(pluginRepository(repoName)) => new PluginGitUploadPack (repoName, baseUrl, routing(repoName))
-      case SimpleCommandRegex ("receive", repoName) if(pluginRepository(repoName)) => new PluginGitReceivePack(repoName, baseUrl, routing(repoName))
-      case DefaultCommandRegex("upload" , owner, repoName) => new DefaultGitUploadPack (owner, repoName, baseUrl)
+      case SimpleCommandRegex ("upload" , repoName) if(pluginRepository(repoName)) => new PluginGitUploadPack (repoName, routing(repoName))
+      case SimpleCommandRegex ("receive", repoName) if(pluginRepository(repoName)) => new PluginGitReceivePack(repoName, routing(repoName))
+      case DefaultCommandRegex("upload" , owner, repoName) => new DefaultGitUploadPack (owner, repoName)
       case DefaultCommandRegex("receive", owner, repoName) => new DefaultGitReceivePack(owner, repoName, baseUrl)
       case _ => new UnknownCommand(command)
     }

src/main/scala/gitbucket/core/ssh/NoShell.scala

@@ -1,12 +1,13 @@
 package gitbucket.core.ssh
 
 import gitbucket.core.service.SystemSettingsService
+import gitbucket.core.service.SystemSettingsService.SshAddress
 import org.apache.sshd.common.Factory
 import org.apache.sshd.server.{Environment, ExitCallback, Command}
 import java.io.{OutputStream, InputStream}
 import org.eclipse.jgit.lib.Constants
 
-class NoShell extends Factory[Command] with SystemSettingsService {
+class NoShell(sshAddress:SshAddress) extends Factory[Command] {
   override def create(): Command = new Command() {
     private var in: InputStream = null
     private var out: OutputStream = null
@@ -15,7 +16,6 @@ class NoShell extends Factory[Command] with SystemSettingsService {
 
     override def start(env: Environment): Unit = {
       val user = env.getEnv.get("USER")
-      val port = loadSystemSettings().sshPort.getOrElse(SystemSettingsService.DefaultSshPort)
       val message =
         """
           | Welcome to
@@ -31,8 +31,8 @@ class NoShell extends Factory[Command] with SystemSettingsService {
           |
           | Please use:
           |
-          | git clone ssh://%s@GITBUCKET_HOST:%d/OWNER/REPOSITORY_NAME.git
-        """.stripMargin.format(user, port).replace("\n", "\r\n") + "\r\n"
+          | git clone ssh://%s@%s:%d/OWNER/REPOSITORY_NAME.git
+        """.stripMargin.format(user, sshAddress.host, sshAddress.port).replace("\n", "\r\n") + "\r\n"
       err.write(Constants.encode(message))
       err.flush()
       in.close()

src/main/scala/gitbucket/core/ssh/SshServerListener.scala

@@ -5,7 +5,8 @@ import java.util.concurrent.atomic.AtomicBoolean
 import javax.servlet.{ServletContextEvent, ServletContextListener}
 
 import gitbucket.core.service.SystemSettingsService
-import gitbucket.core.util.Directory
+import gitbucket.core.service.SystemSettingsService.SshAddress
+import gitbucket.core.util.{Directory}
 import org.apache.sshd.server.keyprovider.SimpleGeneratorHostKeyProvider
 import org.slf4j.LoggerFactory
 
@@ -14,20 +15,20 @@ object SshServer {
   private val server = org.apache.sshd.server.SshServer.setUpDefaultServer()
   private val active = new AtomicBoolean(false)
 
-  private def configure(port: Int, baseUrl: String) = {
-    server.setPort(port)
+  private def configure(sshAddress: SshAddress, baseUrl: String) = {
+    server.setPort(sshAddress.port)
     val provider = new SimpleGeneratorHostKeyProvider(new File(s"${Directory.GitBucketHome}/gitbucket.ser"))
     provider.setAlgorithm("RSA")
     provider.setOverwriteAllowed(false)
     server.setKeyPairProvider(provider)
     server.setPublickeyAuthenticator(new PublicKeyAuthenticator)
     server.setCommandFactory(new GitCommandFactory(baseUrl))
-    server.setShellFactory(new NoShell)
+    server.setShellFactory(new NoShell(sshAddress))
   }
 
-  def start(port: Int, baseUrl: String) = {
+  def start(sshAddress: SshAddress, baseUrl: String) = {
     if(active.compareAndSet(false, true)){
-      configure(port, baseUrl)
+      configure(sshAddress, baseUrl)
       server.start()
       logger.info(s"Start SSH Server Listen on ${server.getPort}")
     }
@@ -55,20 +56,18 @@ class SshServerListener extends ServletContextListener with SystemSettingsServic
 
   override def contextInitialized(sce: ServletContextEvent): Unit = {
     val settings = loadSystemSettings()
-    if(settings.ssh){
-      settings.baseUrl match {
-        case None =>
-          logger.error("Could not start SshServer because the baseUrl is not configured.")
-        case Some(baseUrl) =>
-          SshServer.start(settings.sshPort.getOrElse(SystemSettingsService.DefaultSshPort), baseUrl)
-      }
+    if (settings.sshAddress.isDefined && settings.baseUrl.isEmpty) {
+    	logger.error("Could not start SshServer because the baseUrl is not configured.")
     }
+    for {
+      sshAddress <- settings.sshAddress
+      baseUrl    <- settings.baseUrl
+    }
+    SshServer.start(sshAddress, baseUrl)
   }
 
   override def contextDestroyed(sce: ServletContextEvent): Unit = {
-    if(loadSystemSettings().ssh){
-      SshServer.stop()
-    }
+    SshServer.stop()
   }
 
 }

src/main/scala/gitbucket/core/util/Authenticator.scala

@@ -36,7 +36,7 @@ trait OwnerAuthenticator { self: ControllerBase with RepositoryService with Acco
   private def authenticate(action: (RepositoryInfo) => Any) = {
     {
       defining(request.paths){ paths =>
-        getRepository(paths(0), paths(1), baseUrl).map { repository =>
+        getRepository(paths(0), paths(1)).map { repository =>
           context.loginAccount match {
             case Some(x) if(x.isAdmin) => action(repository)
             case Some(x) if(repository.owner == x.userName) => action(repository)
@@ -95,7 +95,7 @@ trait CollaboratorsAuthenticator { self: ControllerBase with RepositoryService =
   private def authenticate(action: (RepositoryInfo) => Any) = {
     {
       defining(request.paths){ paths =>
-        getRepository(paths(0), paths(1), baseUrl).map { repository =>
+        getRepository(paths(0), paths(1)).map { repository =>
           context.loginAccount match {
             case Some(x) if(x.isAdmin) => action(repository)
             case Some(x) if(paths(0) == x.userName) => action(repository)
@@ -118,7 +118,7 @@ trait ReferrerAuthenticator { self: ControllerBase with RepositoryService =>
   private def authenticate(action: (RepositoryInfo) => Any) = {
     {
       defining(request.paths){ paths =>
-        getRepository(paths(0), paths(1), baseUrl).map { repository =>
+        getRepository(paths(0), paths(1)).map { repository =>
           if(!repository.repository.isPrivate){
             action(repository)
           } else {
@@ -145,7 +145,7 @@ trait ReadableUsersAuthenticator { self: ControllerBase with RepositoryService =
   private def authenticate(action: (RepositoryInfo) => Any) = {
     {
       defining(request.paths){ paths =>
-        getRepository(paths(0), paths(1), baseUrl).map { repository =>
+        getRepository(paths(0), paths(1)).map { repository =>
           context.loginAccount match {
             case Some(x) if(x.isAdmin) => action(repository)
             case Some(x) if(!repository.repository.isPrivate) => action(repository)

src/main/scala/gitbucket/core/util/DatabaseConfig.scala

@@ -1,19 +1,83 @@
 package gitbucket.core.util
 
 import com.typesafe.config.ConfigFactory
-import Directory.DatabaseHome
+import java.io.File
+import Directory._
+import liquibase.database.AbstractJdbcDatabase
+import liquibase.database.core.{PostgresDatabase, MySQLDatabase, H2Database}
+import org.apache.commons.io.FileUtils
 
 object DatabaseConfig {
 
-  private val config = ConfigFactory.load("database")
-  private val dbUrl = config.getString("db.url")
+  private lazy val config = {
+    val file = new File(GitBucketHome, "database.conf")
+    if(!file.exists){
+      FileUtils.write(file,
+        """db {
+          |  url = "jdbc:h2:${DatabaseHome};MVCC=true"
+          |  user = "sa"
+          |  password = "sa"
+          |}
+          |""".stripMargin, "UTF-8")
+    }
+    ConfigFactory.parseFile(file)
+  }
+
+  private lazy val dbUrl = config.getString("db.url")
 
   def url(directory: Option[String]): String =
     dbUrl.replace("${DatabaseHome}", directory.getOrElse(DatabaseHome))
 
-  val url: String = url(None)
-  val user: String = config.getString("db.user")
-  val password: String = config.getString("db.password")
-  val driver: String = config.getString("db.driver")
+  lazy val url: String = url(None)
+  lazy val user: String = config.getString("db.user")
+  lazy val password: String = config.getString("db.password")
+  lazy val jdbcDriver: String = DatabaseType(url).jdbcDriver
+  lazy val slickDriver: slick.driver.JdbcProfile = DatabaseType(url).slickDriver
+  lazy val liquiDriver: AbstractJdbcDatabase = DatabaseType(url).liquiDriver
 
 }
+
+sealed trait DatabaseType {
+  val jdbcDriver: String
+  val slickDriver: slick.driver.JdbcProfile
+  val liquiDriver: AbstractJdbcDatabase
+}
+
+object DatabaseType {
+
+  def apply(url: String): DatabaseType = {
+    if(url.startsWith("jdbc:h2:")){
+      H2
+    } else if(url.startsWith("jdbc:mysql:")){
+      MySQL
+    } else if(url.startsWith("jdbc:postgresql:")){
+      PostgreSQL
+    } else {
+      throw new IllegalArgumentException(s"${url} is not supported.")
+    }
+  }
+
+  object H2 extends DatabaseType {
+    val jdbcDriver = "org.h2.Driver"
+    val slickDriver = slick.driver.H2Driver
+    val liquiDriver = new H2Database()
+  }
+
+  object MySQL extends DatabaseType {
+    val jdbcDriver = "com.mysql.jdbc.Driver"
+    val slickDriver = slick.driver.MySQLDriver
+    val liquiDriver = new MySQLDatabase()
+  }
+
+  object PostgreSQL extends DatabaseType {
+    val jdbcDriver = "org.postgresql.Driver2"
+    val slickDriver = new slick.driver.PostgresDriver {
+      override def quoteIdentifier(id: String): String = {
+        val s = new StringBuilder(id.length + 4) append '"'
+        for(c <- id) if(c == '"') s append "\"\"" else s append c.toLower
+        (s append '"').toString
+      }
+    }
+    val liquiDriver = new PostgresDatabase()
+  }
+}

src/main/scala/gitbucket/core/util/Implicits.scala

@@ -75,6 +75,11 @@ object Implicits {
 
     def gitRepositoryPath: String = request.getRequestURI.replaceFirst("^/git/", "/")
 
+    def baseUrl:String = {
+      val url = request.getRequestURL.toString
+      val len = url.length - (request.getRequestURI.length - request.getContextPath.length)
+      url.substring(0, len).stripSuffix("/")
+    }
   }
 
   implicit class RichSession(session: HttpSession){

src/main/scala/gitbucket/core/util/JDBCUtil.scala

@@ -1,7 +1,13 @@
 package gitbucket.core.util
 
+import java.io._
 import java.sql._
+import java.text.SimpleDateFormat
+import javax.xml.stream.{XMLStreamConstants, XMLInputFactory, XMLOutputFactory}
 import ControlUtil._
+import scala.StringBuilder
+import scala.annotation.tailrec
+import scala.collection.mutable
 import scala.collection.mutable.ListBuffer
 
 /**
@@ -58,6 +64,265 @@ object JDBCUtil {
       }
     }
 
+    def importAsXML(in: InputStream): Unit = {
+      conn.setAutoCommit(false)
+      try {
+        val factory = XMLInputFactory.newInstance()
+        using(factory.createXMLStreamReader(in, "UTF-8")){ reader =>
+          // stateful objects
+          var elementName   = ""
+          var insertTable   = ""
+          var insertColumns = Map.empty[String, (String, String)]
+
+          while(reader.hasNext){
+            reader.next()
+
+            reader.getEventType match {
+              case XMLStreamConstants.START_ELEMENT =>
+                elementName = reader.getName.getLocalPart
+                if(elementName == "insert"){
+                  insertTable = reader.getAttributeValue(null, "table")
+                } else if(elementName == "delete"){
+                  val tableName = reader.getAttributeValue(null, "table")
+                  conn.update(s"DELETE FROM ${tableName}")
+                } else if(elementName == "column"){
+                  val columnName  = reader.getAttributeValue(null, "name")
+                  val columnType  = reader.getAttributeValue(null, "type")
+                  val columnValue = reader.getElementText
+                  insertColumns = insertColumns + (columnName -> (columnType, columnValue))
+                }
+              case XMLStreamConstants.END_ELEMENT =>
+                // Execute insert statement
+                reader.getName.getLocalPart match {
+                  case "insert" => {
+                    val sb = new StringBuilder()
+                    sb.append(s"INSERT INTO ${insertTable} (")
+                    sb.append(insertColumns.map { case (columnName, _) => columnName }.mkString(", "))
+                    sb.append(") VALUES (")
+                    sb.append(insertColumns.map { case (_, (columnType, columnValue)) =>
+                      if(columnType == null || columnValue == null){
+                        "NULL"
+                      } else if(columnType == "string"){
+                        "'" + columnValue.replace("'", "''") + "'"
+                      } else if(columnType == "timestamp"){
+                        "'" + columnValue + "'"
+                      } else {
+                        columnValue.toString
+                      }
+                    }.mkString(", "))
+                    sb.append(")")
+
+                    conn.update(sb.toString)
+
+                    insertColumns = Map.empty[String, (String, String)] // Clear column information
+                  }
+                  case _ => // Nothing to do
+                }
+              case _ => // Nothing to do
+            }
+          }
+        }
+
+        conn.commit()
+
+      } catch {
+        case e: Exception => {
+          conn.rollback()
+          throw e
+        }
+      }
+    }
+
+    def exportAsXML(targetTables: Seq[String]): File = {
+      val dateFormat = new SimpleDateFormat("yyyy-MM-dd'T'HH:mm:ss")
+      val file = File.createTempFile("gitbucket-export-", ".xml")
+
+      val factory = XMLOutputFactory.newInstance()
+      using(factory.createXMLStreamWriter(new FileOutputStream(file), "UTF-8")){ writer =>
+        val dbMeta = conn.getMetaData
+        val allTablesInDatabase = allTablesOrderByDependencies(dbMeta)
+
+        writer.writeStartDocument("UTF-8", "1.0")
+        writer.writeStartElement("tables")
+
+        println(allTablesInDatabase.mkString(", "))
+
+        allTablesInDatabase.reverse.foreach { tableName =>
+          if (targetTables.contains(tableName)) {
+            writer.writeStartElement("delete")
+            writer.writeAttribute("table", tableName)
+            writer.writeEndElement()
+          }
+        }
+
+        allTablesInDatabase.foreach { tableName =>
+          if (targetTables.contains(tableName)) {
+            select(s"SELECT * FROM ${tableName}") { rs =>
+              writer.writeStartElement("insert")
+              writer.writeAttribute("table", tableName)
+              val rsMeta = rs.getMetaData
+              (1 to rsMeta.getColumnCount).foreach { i =>
+                val columnName = rsMeta.getColumnName(i)
+                val (columnType, columnValue) = if(rs.getObject(columnName) == null){
+                  (null, null)
+                } else {
+                  rsMeta.getColumnType(i) match {
+                    case Types.BOOLEAN | Types.BIT => ("boolean", rs.getBoolean(columnName))
+                    case Types.VARCHAR | Types.CLOB | Types.CHAR | Types.LONGVARCHAR => ("string", rs.getString(columnName))
+                    case Types.INTEGER => ("int", rs.getInt(columnName))
+                    case Types.TIMESTAMP => ("timestamp", dateFormat.format(rs.getTimestamp(columnName)))
+                  }
+                }
+                writer.writeStartElement("column")
+                writer.writeAttribute("name", columnName)
+                if(columnType != null){
+                  writer.writeAttribute("type", columnType)
+                }
+                if(columnValue != null){
+                  writer.writeCharacters(columnValue.toString)
+                }
+                writer.writeEndElement()
+              }
+              writer.writeEndElement()
+            }
+          }
+        }
+
+        writer.writeEndElement()
+        writer.writeEndDocument()
+      }
+
+      file
+    }
+
+    def exportAsSQL(targetTables: Seq[String]): File = {
+      val dateFormat = new SimpleDateFormat("yyyy-MM-dd'T'HH:mm:ss")
+      val file = File.createTempFile("gitbucket-export-", ".sql")
+
+      using(new FileOutputStream(file)) { out =>
+        val dbMeta = conn.getMetaData
+        val allTablesInDatabase = allTablesOrderByDependencies(dbMeta)
+
+        allTablesInDatabase.reverse.foreach { tableName =>
+          if (targetTables.contains(tableName)) {
+            out.write(s"DELETE FROM ${tableName};\n".getBytes("UTF-8"))
+          }
+        }
+
+        allTablesInDatabase.foreach { tableName =>
+          if (targetTables.contains(tableName)) {
+            val sb = new StringBuilder()
+            select(s"SELECT * FROM ${tableName}") { rs =>
+              sb.append(s"INSERT INTO ${tableName} (")
+
+              val rsMeta = rs.getMetaData
+              val columns = (1 to rsMeta.getColumnCount).map { i =>
+                (rsMeta.getColumnName(i), rsMeta.getColumnType(i))
+              }
+              sb.append(columns.map(_._1).mkString(", "))
+              sb.append(") VALUES (")
+
+              val values = columns.map { case (columnName, columnType) =>
+                if(rs.getObject(columnName) == null){
+                  null
+                } else {
+                  columnType match {
+                    case Types.BOOLEAN | Types.BIT => rs.getBoolean(columnName)
+                    case Types.VARCHAR | Types.CLOB | Types.CHAR | Types.LONGVARCHAR => rs.getString(columnName)
+                    case Types.INTEGER   => rs.getInt(columnName)
+                    case Types.TIMESTAMP => rs.getTimestamp(columnName)
+                  }
+                }
+              }
+
+              val columnValues = values.map { value =>
+                value match {
+                  case x: String    => "'" + x.replace("'", "''") + "'"
+                  case x: Timestamp => "'" + dateFormat.format(x) + "'"
+                  case null         => "NULL"
+                  case x            => x
+                }
+              }
+              sb.append(columnValues.mkString(", "))
+              sb.append(");\n")
+            }
+
+            out.write(sb.toString.getBytes("UTF-8"))
+          }
+        }
+      }
+
+      file
+    }
+
+    def allTableNames(): Seq[String] = {
+      using(conn.getMetaData.getTables(null, null, "%", Seq("TABLE").toArray)) { rs =>
+        val tableNames = new ListBuffer[String]
+        while (rs.next) {
+          val name = rs.getString("TABLE_NAME").toUpperCase
+          if (name != "VERSIONS" && name != "PLUGIN") {
+            tableNames += name
+          }
+        }
+        tableNames.toSeq
+      }
+    }
+
+    private def childTables(meta: DatabaseMetaData, tableName: String): Seq[String] = {
+      val normalizedTableName =
+        if(meta.getDatabaseProductName == "PostgreSQL"){
+          tableName.toLowerCase
+        } else {
+          tableName
+        }
+
+      using(meta.getExportedKeys(null, null, normalizedTableName)) { rs =>
+        val children = new ListBuffer[String]
+        while (rs.next) {
+          val childTableName = rs.getString("FKTABLE_NAME").toUpperCase
+          if(!children.contains(childTableName)){
+            children += childTableName
+            children ++= childTables(meta, childTableName)
+          }
+        }
+        children.distinct.toSeq
+      }
+    }
+
+
+    private def allTablesOrderByDependencies(meta: DatabaseMetaData): Seq[String] = {
+      val tables = allTableNames.map { tableName =>
+        val result = TableDependency(tableName, childTables(meta, tableName))
+        result
+      }
+
+      val edges = tables.flatMap { table =>
+        table.children.map { child => (table.tableName, child) }
+      }
+
+      tsort(edges).toSeq
+    }
+
+    case class TableDependency(tableName: String, children: Seq[String])
+
+
+    def tsort[A](edges: Traversable[(A, A)]): Iterable[A] = {
+      @tailrec
+      def tsort(toPreds: Map[A, Set[A]], done: Iterable[A]): Iterable[A] = {
+        val (noPreds, hasPreds) = toPreds.partition { _._2.isEmpty }
+        if (noPreds.isEmpty) {
+          if (hasPreds.isEmpty) done else sys.error(hasPreds.toString)
+        } else {
+          val found = noPreds.map { _._1 }
+          tsort(hasPreds.mapValues { _ -- found }, done ++ found)
+        }
+      }
+
+      val toPred = edges.foldLeft(Map[A, Set[A]]()) { (acc, e) =>
+        acc + (e._1 -> acc.getOrElse(e._1, Set())) + (e._2 -> (acc.getOrElse(e._2, Set()) + e._1))
+      }
+      tsort(toPred, Seq())
+    }
   }
 
 }

src/main/scala/gitbucket/core/util/JGitUtil.scala

@@ -32,14 +32,13 @@ object JGitUtil {
    *
    * @param owner the user name of the repository owner
    * @param name the repository name
-   * @param url the repository URL
    * @param commitCount the commit count. If the repository has over 1000 commits then this property is 1001.
    * @param branchList the list of branch names
    * @param tags the list of tags
    */
-  case class RepositoryInfo(owner: String, name: String, url: String, commitCount: Int, branchList: List[String], tags: List[TagInfo]){
-    def this(owner: String, name: String, baseUrl: String) = {
-      this(owner, name, s"${baseUrl}/git/${owner}/${name}.git", 0, Nil, Nil)
+  case class RepositoryInfo(owner: String, name: String, commitCount: Int, branchList: List[String], tags: List[TagInfo]){
+    def this(owner: String, name: String) = {
+      this(owner, name, 0, Nil, Nil)
     }
   }
 
@@ -174,14 +173,14 @@ object JGitUtil {
   /**
    * Returns the repository information. It contains branch names and tag names.
    */
-  def getRepositoryInfo(owner: String, repository: String, baseUrl: String): RepositoryInfo = {
+  def getRepositoryInfo(owner: String, repository: String): RepositoryInfo = {
     using(Git.open(getRepositoryDir(owner, repository))){ git =>
       try {
         // get commit count
         val commitCount = git.log.all.call.iterator.asScala.map(_ => 1).take(10001).sum
 
         RepositoryInfo(
-          owner, repository, s"${baseUrl}/git/${owner}/${repository}.git",
+          owner, repository,
           // commit count
           commitCount,
           // branches
@@ -197,7 +196,7 @@ object JGitUtil {
       } catch {
         // not initialized
         case e: NoHeadException => RepositoryInfo(
-          owner, repository, s"${baseUrl}/git/${owner}/${repository}.git", 0, Nil, Nil)
+          owner, repository, 0, Nil, Nil)
 
       }
     }

src/main/scala/gitbucket/core/util/Version.scala

@@ -1,67 +0,0 @@
-package gitbucket.core.util
-
-import java.sql.Connection
-
-import org.apache.commons.io.IOUtils
-import org.slf4j.LoggerFactory
-import ControlUtil._
-
-case class Version(majorVersion: Int, minorVersion: Int) {
-
-  private val logger = LoggerFactory.getLogger(classOf[Version])
-
-  /**
-   * Execute update/MAJOR_MINOR.sql to update schema to this version.
-   * If corresponding SQL file does not exist, this method do nothing.
-   */
-  def update(conn: Connection, cl: ClassLoader): Unit = {
-    val sqlPath = s"update/${majorVersion}_${minorVersion}.sql"
-
-    using(cl.getResourceAsStream(sqlPath)){ in =>
-      if(in != null){
-        val sql = IOUtils.toString(in, "UTF-8")
-        using(conn.createStatement()){ stmt =>
-          logger.debug(sqlPath + "=" + sql)
-          stmt.executeUpdate(sql)
-        }
-      }
-    }
-  }
-
-
-  /**
-   * MAJOR.MINOR
-   */
-  val versionString = s"${majorVersion}.${minorVersion}"
-
-}
-
-object Versions {
-
-  private val logger = LoggerFactory.getLogger(Versions.getClass)
-
-  def update(conn: Connection, headVersion: Version, currentVersion: Version, versions: Seq[Version], cl: ClassLoader)
-            (save: Connection => Unit): Unit = {
-    logger.debug("Start schema update")
-    try {
-      if(currentVersion == headVersion){
-        logger.debug("No update")
-      } else if(currentVersion.versionString != "0.0" && !versions.contains(currentVersion)){
-        logger.warn(s"Skip migration because ${currentVersion.versionString} is illegal version.")
-      } else {
-        versions.takeWhile(_ != currentVersion).reverse.foreach(_.update(conn, cl))
-        save(conn)
-        logger.debug(s"Updated from ${currentVersion.versionString} to ${headVersion.versionString}")
-      }
-    } catch {
-      case ex: Throwable => {
-        logger.error("Failed to schema update", ex)
-        ex.printStackTrace()
-        conn.rollback()
-      }
-    }
-    logger.debug("End schema update")
-  }
-
-}
-

src/main/scala/gitbucket/core/view/helpers.scala

@@ -9,7 +9,7 @@ import gitbucket.core.plugin.{RenderRequest, PluginRegistry}
 import gitbucket.core.service.{RepositoryService, RequestCache}
 import gitbucket.core.util.{FileUtil, JGitUtil, StringUtil}
 
-import play.twirl.api.Html
+import play.twirl.api.{Html, HtmlFormat}
 
 /**
  * Provides helper methods for Twirl templates.
@@ -225,6 +225,13 @@ object helpers extends AvatarImageProvider with LinkConverter with RequestCache
   def avatarLink(userName: String, size: Int, mailAddress: String = "", tooltip: Boolean = false)(implicit context: Context): Html =
     userWithContent(userName, mailAddress)(avatar(userName, size, tooltip, mailAddress))
 
+  /**
+    * Generates the avatar link to the account page.
+    * If user does not exist or disabled, this method returns avatar image without link.
+    */
+  def avatarLink(commit: JGitUtil.CommitInfo, size: Int)(implicit context: Context): Html =
+    userWithContent(commit.authorName, commit.authorEmailAddress)(avatar(commit, size))
+
   private def userWithContent(userName: String, mailAddress: String = "", styleClass: String = "")(content: Html)(implicit context: Context): Html =
     (if(mailAddress.isEmpty){
       getAccountByUserName(userName)
@@ -306,6 +313,19 @@ object helpers extends AvatarImageProvider with LinkConverter with RequestCache
   private[this] val detectAndRenderLinksRegex = """(?i)\b((?:https?://|www\d{0,3}[.]|[a-z0-9.\-]+[.][a-z]{2,13}/)(?:[^\s()<>]+|\(([^\s()<>]+|(\([^\s()<>]+\)))*\))+(?:\(([^\s()<>]+|(\([^\s()<>]+\)))*\)|[^\s`!()\[\]{};:'".,<>?«»“”‘’]))""".r
 
   def detectAndRenderLinks(text: String): Html = {
-    Html(detectAndRenderLinksRegex.replaceAllIn(text, m => s"""<a href="${m.group(0)}">${m.group(0)}</a>"""))
+    val matches = detectAndRenderLinksRegex.findAllMatchIn(text).toSeq
+
+    val (x, pos) = matches.foldLeft((collection.immutable.Seq.empty[Html], 0)){ case ((x, pos), m) =>
+      val url  = m.group(0)
+      val href = url.replace("\"", "&quot;")
+      (x ++ (Seq(
+        if(pos < m.start) Some(HtmlFormat.escape(text.substring(pos, m.start))) else None,
+        Some(Html(s"""<a href="${href}">${url}</a>"""))
+      ).flatten), m.end)
+    }
+    // append rest fragment
+    val out = if (pos < text.length) x :+ HtmlFormat.escape(text.substring(pos)) else x
+
+    HtmlFormat.fill(out)
   }
 }

src/main/twirl/gitbucket/core/account/application.scala.html

@@ -4,54 +4,52 @@
 @import context._
 @import gitbucket.core.view.helpers._
 @html.main("Applications"){
-<div class="container">
-  <div class="row">
-    <div class="col-md-3">
-      @menu("application", settings.ssh)
-    </div>
-    <div class="col-md-9">
-      <div class="panel panel-default">
-        <div class="panel-heading strong">Personal access tokens</div>
-        <div class="panel-body">
-          @if(personalTokens.isEmpty && gneratedToken.isEmpty){
-            No tokens.
-          } else {
-            Tokens you have generated that can be used to access the GitBucket API.<hr>
-          }
-          @gneratedToken.map{ case (token, tokenString) =>
-            <div class="alert alert-info">
-              Make sure to copy your new personal access token now. You won't be able to see it again!
-            </div>
+<div class="container body">
+  @menu("application", settings.ssh){
+    <div class="panel panel-default">
+      <div class="panel-heading strong">Personal access tokens</div>
+      <div class="panel-body">
+        @if(personalTokens.isEmpty && gneratedToken.isEmpty){
+          No tokens.
+        } else {
+          Tokens you have generated that can be used to access the GitBucket API.
+          <hr style="margin-top: 10px;">
+        }
+        @gneratedToken.map{ case (token, tokenString) =>
+          <div class="alert alert-info">
+            Make sure to copy your new personal access token now. You won't be able to see it again!
+          </div>
+          <a href="@path/@account.userName/_personalToken/delete/@token.accessTokenId" class="btn btn-sm btn-danger pull-right">Delete</a>
+          <div style="width: 50%;">
             @helper.html.copy("generated-token-copy", tokenString){
-              <input type="text" value="@tokenString" style="width:21em" readonly>
+              <input type="text" value="@tokenString" class="form-control input-sm" readonly>
             }
-            <a href="@path/@account.userName/_personalToken/delete/@token.accessTokenId" class="btn btn-mini btn-danger pull-right">Delete</a>
+          </div>
+          <hr style="margin-top: 10px;">
+        }
+        @personalTokens.zipWithIndex.map { case (token, i) =>
+          @if(i != 0){
             <hr>
           }
-          @personalTokens.zipWithIndex.map { case (token, i) =>
-            @if(i != 0){
-              <hr>
-            }
-            <strong>@token.note</strong>
-            <a href="@path/@account.userName/_personalToken/delete/@token.accessTokenId" class="btn btn-mini btn-danger pull-right">Delete</a>
-          }
+          <strong style="line-height: 30px;">@token.note</strong>
+          <a href="@path/@account.userName/_personalToken/delete/@token.accessTokenId" class="btn btn-sm btn-danger pull-right">Delete</a>
+        }
+      </div>
+    </div>
+    <form method="POST" action="@path/@account.userName/_personalToken" validate="true">
+      <div class="panel panel-default">
+        <div class="panel-heading strong">Generate new token</div>
+        <div class="panel-body">
+          <fieldset>
+            <label for="note" class="strong">Token description</label>
+            <div><span id="error-note" class="error"></span></div>
+            <input type="text" name="note" id="note" class="form-control"/>
+            <p class="muted">What's this token for?</p>
+          </fieldset>
+          <input type="submit" class="btn btn-success" value="Generate token"/>
         </div>
       </div>
-      <form method="POST" action="@path/@account.userName/_personalToken" validate="true">
-        <div class="panel panel-default">
-          <div class="panel-heading strong">Generate new token</div>
-          <div class="panel-body">
-            <fieldset>
-              <label for="note" class="strong">Token description</label>
-              <div><span id="error-note" class="error"></span></div>
-              <input type="text" name="note" id="note" class="form-control" style="width: 400px;"/>
-              <p class="muted">What's this token for?</p>
-            </fieldset>
-            <input type="submit" class="btn btn-success" value="Generate token"/>
-          </div>
-        </div>
-      </form>
-    </div>
-  </div>
+    </form>
+  }
 </div>
 }

src/main/twirl/gitbucket/core/account/edit.scala.html

@@ -3,15 +3,11 @@
 @import context._
 @import gitbucket.core.view.helpers._
 @html.main("Edit your profile"){
-<div class="container">
-  <div class="row">
-    <div class="col-md-3">
-      @menu("profile", settings.ssh)
-    </div>
-    <div class="col-md-9">
-      @helper.html.information(info)
-      @if(LDAPUtil.isDummyMailAddress(account)){<div class="alert alert-danger">Please register your mail address.</div>}
-      <form action="@url(account.userName)/_edit" method="POST" validate="true">
+<div class="container body">
+  @menu("profile", settings.ssh){
+    @helper.html.information(info)
+    @if(LDAPUtil.isDummyMailAddress(account)){<div class="alert alert-danger">Please register your mail address.</div>}
+    <form action="@url(account.userName)/_edit" method="POST" validate="true">
       <div class="panel panel-default">
         <div class="panel-heading strong">Profile</div>
         <div class="panel-body">
@@ -49,17 +45,17 @@
               </fieldset>
             </div>
           </div>
-          <div style="margin-top: 20px;">
-            <div class="pull-right">
-              <a href="@path/@account.userName/_delete" class="btn btn-danger" id="delete">Delete account</a>
-            </div>
-            <input type="submit" class="btn btn-success" value="Save"/>
-            @if(!LDAPUtil.isDummyMailAddress(account)){<a href="@url(account.userName)" class="btn btn-default">Cancel</a>}
-          </div>
         </div>
       </div>
+      <div>
+        <div class="pull-right">
+          <a href="@path/@account.userName/_delete" class="btn btn-danger" id="delete">Delete account</a>
+        </div>
+        <input type="submit" class="btn btn-success" value="Save"/>
+        @if(!LDAPUtil.isDummyMailAddress(account)){<a href="@url(account.userName)" class="btn btn-default">Cancel</a>}
+      </div>
     </form>
-  </div>
+  }
 </div>
 }
 <script>

src/main/twirl/gitbucket/core/account/group.scala.html

@@ -2,7 +2,7 @@
 @import context._
 @import gitbucket.core.view.helpers._
 @html.main(if(account.isEmpty) "Create group" else "Edit group"){
-<div class="container">
+<div class="body main-center">
   <form id="form" method="post" action="@if(account.isEmpty){@path/groups/new} else {@path/@account.get.userName/_editgroup}" validate="true">
       <div class="row">
         <div class="col-md-5">
@@ -42,12 +42,12 @@
       <fieldset class="margin">
         @if(account.isDefined){
           <div class="pull-right">
-            <a href="@url(account.get.userName)/_deletegroup" id="delete" class="btn btn-danger btn-lg">Delete Group</a>
+            <a href="@url(account.get.userName)/_deletegroup" id="delete" class="btn btn-danger">Delete Group</a>
           </div>
         }
-        <input type="submit" class="btn btn-success btn-lg" value="@if(account.isEmpty){Create Group} else {Update Group}"/>
+        <input type="submit" class="btn btn-success" value="@if(account.isEmpty){Create Group} else {Update Group}"/>
         @if(account.isDefined){
-          <a href="@url(account.get.userName)" class="btn btn-default btn-lg">Cancel</a>
+          <a href="@url(account.get.userName)" class="btn btn-default">Cancel</a>
         }
       </fieldset>
   </form>
@@ -107,18 +107,18 @@ $(function(){
   }
 
   function addMemberHTML(userName, isManager){
-    var memberButton = $('<button type="button" class="btn btn-default btn-mini" value="false">Member</button>').data('name', userName);
+    var memberButton = $('<label class="btn btn-default btn-mini"><input type="radio" value="false" name="' + userName + '">Member</label>');
     if(!isManager){
       memberButton.addClass('active');
     }
-    var managerButton = $('<button type="button" class="btn btn-default btn-mini" value="true">Manager</button>').data('name', userName);
+    var managerButton = $('<label class="btn btn-default btn-mini"><input type="radio" value="true" name="' + userName + '">Manager</label>');
     if(isManager){
       managerButton.addClass('active');
     }
 
     $('#member-list').append($('<li>')
       .data('name', userName)
-      .append($('<div class="btn-group is_manager" data-toggle="buttons-radio">')
+      .append($('<div class="btn-group is_manager" data-toggle="buttons">')
         .append(memberButton)
         .append(managerButton))
       .append(' ')
@@ -130,9 +130,7 @@ $(function(){
   function updateMembers(){
     var members = $('#member-list li').map(function(i, e){
       var userName = $(e).data('name');
-      return userName + ':' + $('button.active').filter(function(i, e){
-        return $(e).data('name') == userName;
-      }).attr('value');
+      return userName + ':' + $(e).find('label.active input[type=radio]').attr('value');
     }).get().join(',');
     $('#members').val(members);
   }

src/main/twirl/gitbucket/core/account/main.scala.html

@@ -3,57 +3,57 @@
 @import context._
 @import gitbucket.core.view.helpers._
 @html.main(account.userName){
-  <div class="container">
-    <div class="container-fluid">
-      <div class="row">
-        <div class="col-md-4">
-          <div class="block">
-            <div class="account-image">@avatar(account.userName, 270)</div>
-            <div class="account-fullname">@account.fullName</div>
-            <div class="account-username">@account.userName</div>
-          </div>
-          <div class="block">
-            @if(account.url.isDefined){
-              <div><i class="octicon octicon-home"></i> <a href="@account.url">@account.url</a></div>
-            }
-            <div><i class="octicon octicon-clock"></i> <span class="muted">Joined on</span> @date(account.registeredDate)</div>
-          </div>
-          @if(groupNames.nonEmpty){
-            <div>
-              <div>Groups</div>
-              @groupNames.map { groupName =>
-                <a href="@url(groupName)">@avatar(groupName, 36, tooltip = true)</a>
-              }
-            </div>
-          }
-
-        </div>
-        <div class="col-md-8">
-          <ul class="nav nav-tabs" style="margin-bottom: 5px;">
-            <li@if(active == "repositories"){ class="active"}><a href="@url(account.userName)?tab=repositories">Repositories</a></li>
-            @if(account.isGroupAccount){
-              <li@if(active == "members"){ class="active"}><a href="@url(account.userName)?tab=members">Members</a></li>
-            } else {
-              <li@if(active == "activity"){ class="active"}><a href="@url(account.userName)?tab=activity">Public Activity</a></li>
-            }
-            @if(loginAccount.isDefined && loginAccount.get.userName == account.userName){
-              <li class="pull-right">
-                <div class="button-group">
-                  <a href="@url(account.userName)/_edit" class="btn btn-default">Edit Your Profile</a>
-                </div>
-              </li>
-            }
-            @if(loginAccount.isDefined && account.isGroupAccount && isGroupManager){
-              <li class="pull-right">
-                <div class="button-group">
-                  <a href="@url(account.userName)/_editgroup" class="btn btn-default">Edit Group</a>
-                </div>
-              </li>
-            }
-          </ul>
-          @body
-        </div>
+  <div class="container body">
+    <div class="main-sidebar">
+      <div class="block">
+        <div class="account-image">@avatar(account.userName, 240)</div>
+        <div class="account-fullname">@account.fullName</div>
+        <div class="account-username">@account.userName</div>
       </div>
+      <div class="block">
+        @if(account.url.isDefined){
+          <div><i class="octicon octicon-home"></i> <a href="@account.url">@account.url</a></div>
+        }
+        <div><i class="octicon octicon-clock"></i> <span class="muted">Joined on</span> @date(account.registeredDate)</div>
+      </div>
+      @if(groupNames.nonEmpty){
+        <div>
+          <div>Groups</div>
+          @groupNames.map { groupName =>
+            @avatarLink(groupName, 36, tooltip = true)
+          }
+        </div>
+      }
+    </div>
+    <div class="main-content">
+      <ul class="nav nav-tabs" style="margin-bottom: 5px;">
+        <li@if(active == "repositories"){ class="active"}><a href="@url(account.userName)?tab=repositories">Repositories</a></li>
+        @if(account.isGroupAccount){
+          <li@if(active == "members"){ class="active"}><a href="@url(account.userName)?tab=members">Members</a></li>
+        } else {
+          <li@if(active == "activity"){ class="active"}><a href="@url(account.userName)?tab=activity">Public Activity</a></li>
+        }
+        @gitbucket.core.plugin.PluginRegistry().getProfileTabs.map { tab =>
+          @tab(account, context).map { link =>
+            <li@if(active == link.id){ class="active"}><a href="@path/@link.path">@link.label</a></li>
+          }
+        }
+        @if(loginAccount.isDefined && loginAccount.get.userName == account.userName){
+          <li class="pull-right">
+            <div class="button-group">
+              <a href="@url(account.userName)/_edit" class="btn btn-default">Edit Your Profile</a>
+            </div>
+          </li>
+        }
+        @if(loginAccount.isDefined && account.isGroupAccount && isGroupManager){
+          <li class="pull-right">
+            <div class="button-group">
+              <a href="@url(account.userName)/_editgroup" class="btn btn-default">Edit Group</a>
+            </div>
+          </li>
+        }
+      </ul>
+      @body
     </div>
   </div>
 }

src/main/twirl/gitbucket/core/account/menu.scala.html

@@ -1,7 +1,7 @@
-@(active: String, ssh: Boolean)(implicit context: gitbucket.core.controller.Context)
+@(active: String, ssh: Boolean)(body: Html)(implicit context: gitbucket.core.controller.Context)
 @import context._
-<div class="box">
-  <ul class="nav nav-tabs nav-stacked side-menu">
+<div class="main-sidebar">
+  <ul class="nav nav-pills nav-stacked">
     <li@if(active=="profile"){ class="active"}>
       <a href="@path/@loginAccount.get.userName/_edit">Profile</a>
     </li>
@@ -13,5 +13,15 @@
     <li@if(active=="application"){ class="active"}>
       <a href="@path/@loginAccount.get.userName/_application">Applications</a>
     </li>
+    @gitbucket.core.plugin.PluginRegistry().getAccountSettingMenus.map { menu =>
+      @menu(context).map { link =>
+        <li@if(active==link.id){ class="active"}>
+          <a href="@path/@link.path">@link.label</a>
+        </li>
+      }
+    }
   </ul>
 </div>
+<div class="main-content">
+  @body
+</div>

src/main/twirl/gitbucket/core/account/newrepo.scala.html

@@ -3,7 +3,7 @@ isCreateRepoOptionPublic: Boolean)(implicit context: gitbucket.core.controller.C
 @import context._
 @import gitbucket.core.view.helpers._
 @html.main("Create a New Repository"){
-<div style="width: 600px; margin: 10px auto;">
+<div class="body main-center">
   <h2>Create a new repository</h2>
   <p class="muted">
     A repository contains all the files for your project, including the revision history.
@@ -67,7 +67,7 @@ isCreateRepoOptionPublic: Boolean)(implicit context: gitbucket.core.controller.C
       </label>
     </fieldset>
     <fieldset class="margin form-actions">
-      <input type="submit" class="btn btn-success btn-lg" value="Create repository"/>
+      <input type="submit" class="btn btn-success" value="Create repository"/>
     </fieldset>
   </form>
 </div>

src/main/twirl/gitbucket/core/account/register.scala.html

@@ -2,7 +2,7 @@
 @import context._
 @import gitbucket.core.view.helpers._
 @html.main("Create your account"){
-<div class="container">
+<div class="container body">
   <h3>Create your account</h3>
   <form action="@path/register" method="POST" validate="true">
     <div class="row">

src/main/twirl/gitbucket/core/account/ssh.scala.html

@@ -3,46 +3,41 @@
 @import context._
 @import gitbucket.core.view.helpers._
 @html.main("SSH Keys"){
-<div class="container">
-  <div class="row">
-    <div class="col-md-3">
-      @menu("ssh", settings.ssh)
+<div class="container body">
+  @menu("ssh", settings.ssh){
+    <div class="panel panel-default">
+      <div class="panel-heading strong">SSH Keys</div>
+      <div class="panel-body">
+        @if(sshKeys.isEmpty){
+          No keys
+        }
+        @sshKeys.zipWithIndex.map { case (key, i) =>
+          @if(i != 0){
+            <hr>
+          }
+          <strong style="line-height: 30px;">@key.title</strong> (@SshUtil.fingerPrint(key.publicKey).getOrElse("Key is invalid."))
+          <a href="@path/@account.userName/_ssh/delete/@key.sshKeyId" class="btn btn-sm btn-danger pull-right">Delete</a>
+        }
+      </div>
     </div>
-    <div class="col-md-9">
+    <form method="POST" action="@path/@account.userName/_ssh" validate="true">
       <div class="panel panel-default">
-        <div class="panel-heading strong">SSH Keys</div>
+        <div class="panel-heading strong">Add an SSH Key</div>
         <div class="panel-body">
-          @if(sshKeys.isEmpty){
-            No keys
-          }
-          @sshKeys.zipWithIndex.map { case (key, i) =>
-            @if(i != 0){
-              <hr>
-            }
-            <strong>@key.title</strong> (@SshUtil.fingerPrint(key.publicKey).getOrElse("Key is invalid."))
-            <a href="@path/@account.userName/_ssh/delete/@key.sshKeyId" class="btn btn-mini btn-danger pull-right">Delete</a>
-          }
+          <fieldset class="form-group">
+            <label for="title" class="strong">Title</label>
+            <div><span id="error-title" class="error"></span></div>
+            <input type="text" name="title" id="title" class="form-control"/>
+          </fieldset>
+          <fieldset class="form-group">
+            <label for="publicKey" class="strong">Key</label>
+            <div><span id="error-publicKey" class="error"></span></div>
+            <textarea name="publicKey" id="publicKey" class="form-control" style="height: 250px;"></textarea>
+          </fieldset>
+          <input type="submit" class="btn btn-success" value="Add"/>
         </div>
       </div>
-      <form method="POST" action="@path/@account.userName/_ssh" validate="true">
-        <div class="panel panel-default">
-          <div class="panel-heading strong">Add an SSH Key</div>
-          <div class="panel-body">
-            <fieldset class="form-group">
-              <label for="title" class="strong">Title</label>
-              <div><span id="error-title" class="error"></span></div>
-              <input type="text" name="title" id="title" class="form-control" style="width: 400px;"/>
-            </fieldset>
-            <fieldset class="form-group">
-              <label for="publicKey" class="strong">Key</label>
-              <div><span id="error-publicKey" class="error"></span></div>
-              <textarea name="publicKey" id="publicKey" class="form-control" style="width: 600px; height: 250px;"></textarea>
-            </fieldset>
-            <input type="submit" class="btn btn-success" value="Add"/>
-          </div>
-        </div>
-      </form>
-    </div>
-  </div>
+    </form>
+  }
 </div>
 }

src/main/twirl/gitbucket/core/admin/data.scala.html

@@ -0,0 +1,56 @@
+@(tableNames: Seq[String])(implicit context: gitbucket.core.controller.Context)
+@import context._
+@import gitbucket.core.view.helpers._
+@html.main("Data export / import"){
+  @admin.html.menu("data") {
+    <div class="panel panel-default">
+      <div class="panel-heading strong">Export</div>
+      <div class="panel-body">
+        <form class="form form-horizontal" action="@path/admin/export" method="POST">
+          @tableNames.map { tableName =>
+            <div class="checkbox">
+              <label>
+                <input type="checkbox" name="tableNames" id="@tableName" value="@tableName" checked/> @tableName
+              </label>
+            </div>
+          }
+          <input type="submit" class="btn btn-success pull-right" value="Export">
+          <div class="radio pull-right" style="margin-right: 10px;">
+            <label>
+              <input type="radio" name="type" value="sql">SQL
+            </label>
+          </div>
+          <div class="radio pull-right" style="margin-right: 10px;">
+            <label>
+              <input type="radio" name="type" value="xml" checked>XML
+            </label>
+          </div>
+        </form>
+      </div>
+    </div>
+
+    <div class="panel panel-default">
+      <div class="panel-heading strong">Import (only XML)</div>
+      <div class="panel-body">
+        <form class="form form-horizontal" action="@path/upload/import" method="POST" enctype="multipart/form-data" id="import-form">
+          <input type="file" name="file" id="file">
+          <input type="submit" class="btn btn-success pull-right" value="Import" id="import">
+        </form>
+      </div>
+    </div>
+  }
+}
+<script>
+$(function(){
+  $('#import-form').submit(function(){
+    if($('#file').val() == ''){
+      alert('Choose an import XML file.');
+      return false;
+    } else if(!$('#file').val().endsWith(".xml")){
+      alert('Import is available for only the XML file.');
+      return false;
+    }
+    return confirm('All existing data is deleted before importing.\nAre you sure?');
+  })
+})
+</script>

src/main/twirl/gitbucket/core/admin/menu.scala.html

@@ -1,25 +1,33 @@
 @(active: String)(body: Html)(implicit context: gitbucket.core.controller.Context)
 @import context._
 <div class="container body">
-  <div class="row">
-    <div class="col-md-3">
-      <ul class="nav nav-tabs nav-stacked side-menu" id="system-admin-menu-container">
-        <li@if(active=="users"){ class="active"}>
-          <a href="@path/admin/users">User Management</a>
-        </li>
-        <li@if(active=="system"){ class="active"}>
-          <a href="@path/admin/system">System Settings</a>
-        </li>
-        <li@if(active=="plugins"){ class="active"}>
+  <div class="main-sidebar">
+    <ul class="nav nav-pills nav-stacked" id="system-admin-menu-container">
+      <li@if(active=="users"){ class="active"}>
+        <a href="@path/admin/users">User Management</a>
+      </li>
+      <li@if(active=="system"){ class="active"}>
+        <a href="@path/admin/system">System Settings</a>
+      </li>
+      <li@if(active=="plugins"){ class="active"}>
         <a href="@path/admin/plugins">Plugins</a>
-        </li>
-        <li>
-          <a href="@path/console/login.jsp">H2 Console</a>
-        </li>
-     </ul>
-    </div>
-    <div class="col-md-9">
-      @body
-    </div>
+      </li>
+      <li@if(active=="data"){ class="active"}>
+      <a href="@path/admin/data">Data export / import</a>
+      </li>
+      <li>
+        <a href="@path/console/login.jsp">H2 Console</a>
+      </li>
+      @gitbucket.core.plugin.PluginRegistry().getSystemSettingMenus.map { menu =>
+        @menu(context).map { link =>
+          <li@if(active==link.id){ class="active"}>
+            <a href="@path/@link.path">@link.label</a>
+          </li>
+        }
+      }
+   </ul>
+  </div>
+  <div class="main-content">
+    @body
   </div>
 </div>

src/main/twirl/gitbucket/core/admin/system.scala.html

@@ -9,11 +9,23 @@
       <div class="panel panel-default">
         <div class="panel-heading strong">System Settings</div>
         <div class="panel-body">
-          <!--====================================================================-->
-          <!-- GITBUCKET_HOME -->
-          <!--====================================================================-->
-          <label class="strong">GITBUCKET_HOME</label>
-          @GitBucketHome
+            <!--====================================================================-->
+            <!-- System properties -->
+            <!--====================================================================-->
+          <table class="table table-bordered">
+            <tr>
+              <th>Property</th>
+              <th>Value</th>
+            </tr>
+            <tr>
+              <td>GITBUCKET_HOME</td>
+              <td>@GitBucketHome</td>
+            </tr>
+            <tr>
+              <td>DATBASE_URL</td>
+              <td>@gitbucket.core.util.DatabaseConfig.url</td>
+            </tr>
+          </table>
           <!--====================================================================-->
           <!-- Base URL -->
           <!--====================================================================-->
@@ -111,15 +123,24 @@
               Enable SSH access to git repository
             </label>
           </fieldset>
-          <div class="form-group ssh">
-            <label class="control-label col-md-3" for="sshPort">SSH Port</label>
-            <div class="col-md-9">
-              <input type="text" id="sshPort" name="sshPort" class="form-control" value="@settings.sshPort"/>
-              <span id="error-sshPort" class="error"></span>
+          <div class="ssh">
+            <div class="form-group">
+              <label class="control-label col-md-3" for="sshHost">SSH Host</label>
+              <div class="col-md-9">
+                <input type="text" id="sshHost" name="sshHost" class="form-control" value="@settings.sshHost"/>
+                <span id="error-sshHost" class="error"></span>
+              </div>
+            </div>
+            <div class="form-group">
+              <label class="control-label col-md-3" for="sshPort">SSH Port</label>
+              <div class="col-md-9">
+                <input type="text" id="sshPort" name="sshPort" class="form-control" value="@settings.sshPort"/>
+                <span id="error-sshPort" class="error"></span>
+              </div>
             </div>
           </div>
           <p class="muted">
-            Base URL is required if SSH access is enabled.
+             Both of SSH host and Base URL are required if SSH access is enabled.
           </p>
           <!--====================================================================-->
           <!-- Authentication -->